Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2052 ATGGGGAAGGCCAGAAAATGGATCAGAAACTTCCTTCTAGGGAAAAAAGAAGATAAAATCAAGAAGATCGAGGATAAGAGTCTGATTGTGAGTCCCAAAGTGAAGTGCAGATGGAGCTTTGGAAAACTAACAGGAGGAAGAATAACAAGCAAGGTAGTAGGCCATAAATTTTCCAGATCATTTGACTCAGGTGACTCTGCCAAGCTGCAAATACAACCCTTGTTGGAAACTAAGACTCCAAGGCATCTTCCAAAACCACTAGCAAAGGCTTCTAAAGATAAAAACAAAGCCGCTACAAAGATTCAGGCCAGCTTTCGCTCGTATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTACACTACGTGGAATGCATGCGTTGATGGCCATACAAGTTAGAGCCCGAATTCACAGAATTCAGATGGCAGAGGAAGCAAACCTCCTCGGACAACAGCCTCTGCAACATAGACAACTCCCATACTTCACAGATCTCATTACAGAAGAAAATAAAGATTCAAACGATATGAGTGTGGAAGAAATAGTGGAGGTTTTGAAAAGCAGGAGTGGCCCACTAGATGGTTCATATGTTAAGGGAAGAGAGCGTGATTCCATGACATACTATTCGAAGCATGTGCCGGTTGTTTCTAAACGACAAAACCAATACAAGAAAACTCTAATGGTAGAACCAAACAGCCTAGGAAACTACCGTGCCATGTCTGAATTTAACCCAGCGACAATTGCCTTGTCAACTTCTCAGCGCCATTATGTGCCTCACCGTCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGCAAGGTCACAGAGTGAACCGAAACAACGACCAAGACGGGGAACGAGGCACAAAGGCAAGTCTGTGGAATCCCCATTGAATGGTCCAAGGCAAAATCTATTCTCAAACTCGTTACGCTTCGATCACAGAAGCCTGGACCATTGGGTTATCAATCCTCATGGGTCAAAAAACGACAGCAGGCGCAATTCCTTTGGCAGCAGCTCGGTTACTACTGAATCCTATTATTGA 1113 0.4385 MGKARKWIRNFLLGKKEDKIKKIEDKSLIVSPKVKCRWSFGKLTGGRITSKVVGHKFSRSFDSGDSAKLQIQPLLETKTPRHLPKPLAKASKDKNKAATKIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMAEEANLLGQQPLQHRQLPYFTDLITEENKDSNDMSVEEIVEVLKSRSGPLDGSYVKGRERDSMTYYSKHVPVVSKRQNQYKKTLMVEPNSLGNYRAMSEFNPATIALSTSQRHYVPHRQSLSPNYMNKTESSRAKARSQSEPKQRPRRGTRHKGKSVESPLNGPRQNLFSNSLRFDHRSLDHWVINPHGSKNDSRRNSFGSSSVTTESYY* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2052 370 MobiDBLite consensus disorder prediction 350 370 - -
Gso19g2052 370 Pfam Protein of unknown function (DUF4005) 275 313 IPR025064 -
Gso19g2052 370 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Gso19g2052 370 MobiDBLite consensus disorder prediction 271 329 - -
Gso19g2052 370 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
Gso19g2052 370 MobiDBLite consensus disorder prediction 346 370 - -
Gso19g2052 370 MobiDBLite consensus disorder prediction 271 293 - -
Gso19g2052 370 Pfam IQ calmodulin-binding motif 121 135 IPR000048 GO:0005515
Gso19g2052 370 Pfam IQ calmodulin-binding motif 96 114 IPR000048 GO:0005515
Gso19g2052 370 SMART iq_5 116 137 IPR000048 GO:0005515
Gso19g2052 370 SMART iq_5 93 115 IPR000048 GO:0005515
Gso19g2052 370 Gene3D - 91 164 - -
Gso19g2052 370 PANTHER IQ-DOMAIN 5-RELATED 1 357 - -
Gso19g2052 370 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2052 Gso-Chr19 49099202 49101463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2052 1 306 IQD Protein Family AT4G14750 33.861 4.55e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2052 - - gmx:100781320 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2052 19 49099202 49101463 Gso19g2052 19 49099202 49101463 ECH
Gso19g2052 19 49099202 49101463 Gso3g2092 3 46264725 46266743 GST