Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2037 ATGGCCTCATCTTCTCCCTCTCTAATGTTCACAGTGCGAAGGTGCCAACCTGAGCTGGTGGCTCCTGCTACACCCACTCCTCACCAACTTAAACCACTATCCGACATAGATGATCAAGACGGCTTTCGTTTCCAGGTTCCAATTATTCAGATTTATCATAACCAACCATCAATGGCAGGGAAAGACCCTGTTGAAGTCATTCGGCAGGCACTGGCAAAAACACTTGTTTTCTATTACCCATTTGCCGGTAGGCTTAGGGAGGGCCCTGACCGCAAATTAATGGTGGATTGTACTGGGGAGGGCGTCATGTTCATTGAGGCTGATGCAGACGTAACACTTTATCAGTTTGGTGGTGAAGCTCTCCAACCTCCATTCCCATGCTTCCAAGAACTTCTATATAATGTTCCAGAGACTGAAGAAATTACTAACACTCCCCTTCTACTCATACAGGTGACACGACTCAGGTGTGGTGGTTTCATCCTGGCCACTCGCATGAACCACACCATGAGCGATGGAGCTGGTTTGTCACAATTCATGAACACTTGGGCTGAAATGGCTCGAGGTGTTAAAAGTCCTTCCATTGTACCTGTGTGGCGTAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACATGCAACCATCGCGAATACGAGCATGTCCCAGACACCAAGGAAGGGACCATCACTTCCTCGTACGACAACGACAACAACATGGTTCATCGATCATTCTTCCTAGGACCTGTCGAGATAGCAGCCCTTCGCCGCTTGATTCCCCATAACCTTAAATACTGCACCACATTTGATATCATCACAGCATGCTTGTGGCGCTGTCGCACAAAAGCATTGCAAATAGAGGCAGATGAGGATGTTCGCATGATGTGCATAGTCAATGCACGTGCCAGGTTCAATCCTCCATTACCTGTTGGTTACTACGGCAACGTTTTTGCATACCCTGCAGCAATCACCACTGCAGGGAAGCTTTGTGGAAATCCATTTGGGTATGCGGTGGAGTTAATCAACAAAGTGAAACGTGAGGTGACGGAGGAGTATATGCATTCTGTGGCAGATCTATTGGTGATCAAGGGACGATGCTTATTTAACACTGTACGGTCTTATATTGTGTCGGATTTGTCACGTGCCAAGTTTAGGAATGTAGATTTTGGGTGGGGTGATGCTGTGTTTGGTGGACCGGCAAAATGTGGGGCAGGGGCTTTTCCAGGAGTTTCCTATTTCACCCCGGGTAAGAATGCAAAAGGAGAAGAAGGTATAATATTTGCGATTGGGTTGCCTGATGAAGCAATGGAGAGGTTTGCAAAAGAGTTGAATGACATGCTTAGGAACCAAAACCAACCTCAAACGAGTGGTGCTAACTTTATCATGTCTTCCCTGTAA 1395 0.471 MASSSPSLMFTVRRCQPELVAPATPTPHQLKPLSDIDDQDGFRFQVPIIQIYHNQPSMAGKDPVEVIRQALAKTLVFYYPFAGRLREGPDRKLMVDCTGEGVMFIEADADVTLYQFGGEALQPPFPCFQELLYNVPETEEITNTPLLLIQVTRLRCGGFILATRMNHTMSDGAGLSQFMNTWAEMARGVKSPSIVPVWRRELLMARDPPRITCNHREYEHVPDTKEGTITSSYDNDNNMVHRSFFLGPVEIAALRRLIPHNLKYCTTFDIITACLWRCRTKALQIEADEDVRMMCIVNARARFNPPLPVGYYGNVFAYPAAITTAGKLCGNPFGYAVELINKVKREVTEEYMHSVADLLVIKGRCLFNTVRSYIVSDLSRAKFRNVDFGWGDAVFGGPAKCGAGAFPGVSYFTPGKNAKGEEGIIFAIGLPDEAMERFAKELNDMLRNQNQPQTSGANFIMSSL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2037 464 Gene3D - 221 442 IPR023213 -
Gso19g2037 464 Gene3D - 11 220 IPR023213 -
Gso19g2037 464 PANTHER ALCOHOL ACYLTRANSFERASE 10 448 - -
Gso19g2037 464 Pfam Transferase family 15 444 - -
Gso19g2037 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2037 Gso-Chr19 48958094 48960873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2037 19 442 Monolignol Biosynthesis Gene Families AT5G48930 31.871 1.19e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2037 K19861 - gmx:100792864 953.355