Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2034 ATGAACTTGTCGCGAATCACCTTGCGGCCTTTGAAGCTGAGCGACGTAGATGATTTCATGGTCGTAGCTGGTGATGATAGAGTGACTCGCTACACCCGATGGAACACTTTTGTTTCGAGGGAGCAAGCGTTGACTTTCATTCGAGATCATCAACATCCATGGACTCGCGCCATATGCGTTGACGATGTAACCATTGGATATGTGTCGGTGTCTCCTGGATCGGGTGATGACAGGTGTAGGGCTGAGATTGGCTGTTACATAGCTACCGATTACTGGGGCCAAGGGATTGCCACCGAAGCAACGAAGATTGCTGCGTCACAAGTCTTCAAGGATCTCCCTGGCTTGGTGAGGTTACAAGCTTTTGTTGCTGTAGAGAACAAAGCGTCCCAAAGGGTGTTGGAAAAAGCAGGGTTTCTTAGGGAGGCCATACTCAAAAGGTATGCGTATGTCAAGGGAATGATTAAGGATGTCGCTATTTTTAGTCTTGTGTTACAGGATACCCATTCTTCTTCATTGTAA 519 0.474 MNLSRITLRPLKLSDVDDFMVVAGDDRVTRYTRWNTFVSREQALTFIRDHQHPWTRAICVDDVTIGYVSVSPGSGDDRCRAEIGCYIATDYWGQGIATEATKIAASQVFKDLPGLVRLQAFVAVENKASQRVLEKAGFLREAILKRYAYVKGMIKDVAIFSLVLQDTHSSSL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2034 172 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 1 169 - -
Gso19g2034 172 Gene3D - 2 165 - -
Gso19g2034 172 Pfam Acetyltransferase (GNAT) domain 5 138 IPR000182 GO:0016407
Gso19g2034 172 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 162 IPR016181 -
Gso19g2034 172 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 158 IPR000182 GO:0016407
Gso19g2034 172 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2034 Gso-Chr19 48931198 48931795 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso19g2034 Acetyltransf_3 4.4e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2034 - - gmx:100776526 344.739