Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2033 ATGGCAAGGGTGGATCTCTCCAGGATTAGTCTCCGACCATTCAAGATGAGTGATGTTGACGATTTCTTGATATGGGCAGGGGATGATCAAGTGACTCGAAACCTCCGATGGAAGACGTGTGGTTCAAGGGAAGAGGCTCTGGCCTTCATAAGGGATGTTTGCATACCTCACCCATGGCGTAGATCAATCTGCCTTGATGACCGTTCCATCGGCTTTGTTTCGGTGTATCCTTGGTCGGGCGATGAAAGGTGCAAGGCCGACATAGGCTATGCTATTGGGACCAACTACTGGGGCCAAGGGATAGCTACCAAAGCACTCATGACTGCAGTGCCTCAAGTCTTCAAGGACTTTAACGAATTGCTAAGGTTGCAGGCTTTTGTTGATGTTGAGAACAAGGCTTCTCAGAGGGTGTTGGAAAAGGCTGGGTTCCTTAGAGAGGGTGTCCTCAGAAAGTACACTTATCTTAAGGGGGTTGTTAAGGATTTGGTTTTGTATAGTTTTTTGTCAACGGATGAAATTACTTCTTGTGACTAG 534 0.4719 MARVDLSRISLRPFKMSDVDDFLIWAGDDQVTRNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDERCKADIGYAIGTNYWGQGIATKALMTAVPQVFKDFNELLRLQAFVDVENKASQRVLEKAGFLREGVLRKYTYLKGVVKDLVLYSFLSTDEITSCD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2033 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 168 IPR016181 -
Gso19g2033 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 165 IPR000182 GO:0016407
Gso19g2033 177 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016407
Gso19g2033 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 174 - -
Gso19g2033 177 Gene3D - 4 168 - -
Gso19g2033 177 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2033 Gso-Chr19 48926256 48927006 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso19g2033 Acetyltransf_3 8.8e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2033 - - gmx:100527210 364.385