Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2027 ATGTCACCAGATTTCACACTTTTGTTCTCCCCGGAACTCATGCAGTCCCCTATCATCACTTTCCAAGCCACTTTCTGTGTCCTTCTCTTCACCCTCATGTTCACGCTGTTCTTCACTCCTGGTGGGCTTCCTTGGGCCTGGGCCCGGCCCAGAACCATCATCCCTGGCCCAGTAACTGCCCTGCTCGGGGTCTTCACGGGTTCCACACCTCACAGCGCTTTATCCAAACTGGCCCGCACTTATCACGCGGAAAAGCTCATGGCTTTCTCCATCGGTTTAACCCGGTTCGTTATCTCCAGCGAACCGGAAACCGCAAAGGAGATTCTCGGCAGCCCCGGTTTTGCGGACAGGCCGGTGAAGGAATCCGCCTATGAGCTTCTCTTCCACCGTGCAATGGGTTTCGCACCGTACGGAGAGTACTGGAGAAACCTGAGGAGAATCTCAGCCCTACATCTCTTCTCCCCGAAGAGAATCACCAGCTCTGAGTCCTTCAGGAGCAAGGTTGGGTTAAAAATGGTTGAACAAGTTAAGAAAACCATGAGTGAGAACCAACACGTCGAGGTTAAGAAAATTCTACACTTTAGTTCGTTGAACAATGTGATGATGACGGTGTTTGGTAAGTGTTATGAGTTTTACGAGGGTGAGGGTTTGGAGCTTGAGGGTTTGGTGAGTGAAGGGTATGAGTTGTTGGGTGTTTTTAACTGGAGTGACCATTTTCCGGTTTTGGGGTGGTTGGATTTGCAGGGGGTGAGGAAGAGGTGTAGGTGTTTGGTTGAAAAGGTTAATGTTTTTGTTGGAGGGGTTATTAAGGAGCATAGGGTGAAGAGGGAGAGGGGTGACTGTGTGAAGGATGAAGGAGCTGAGGATTTTGTTGATGTTTTGCTTGATTTGGAGAAGGAAAACAGGCTCAGTGAAGCTGACATGATTGCTGTTCTTTGGGAAATGATATTCAGGGGAACTGACACGGTAGCAATTCTGCTAGAGTGGATTCTGGCTCGCATGGTTCTCCACCCTGAAATCCAAGCAAAGGCACAGCGCGAAATAGACTTCGTTTGCGGATCCTCCAGGCTCGTATCCGAAGCAGACATTCCGAACCTGCGCTACCTTCAGTGCATAGTAAAAGAAACCCTCCGTGTGCACCCACCAGGCCCGCTACTCTCGTGGGCTCGCCTTGCTGTGCACGACGTTACGGTTGGCGGCAAGCACGTGATTCCCAAGGGCACCACCGCGATGGTGAACATGTGGGCCATAACCCACGACGAGAGGGTGTGGGCCGAGCCCGAGAAGTTTAGGCCCGAGCGGTTTGTGGAAGAGGATGTGAGCATAATGGGGTCTGATTTGAGGTTGGCACCTTTCGGGTCTGGAAGAAGAGTGTGTCCTGGGAAGGCCCTTGGTTTGGCCTCGGTTCATCTTTGGCTCGCTCAGTTGCTTCAAAATTTTCATTGGGTTTCATCTGATGGTGTTTCTGTGGAATTGGATGAGTTTCTCAAGCTTTCTATGGAGATGAAGAAGCCACTGTCTTGCAAGGCTGTGCCTAGGGTTTCTGTTTAG 1551 0.5093 MSPDFTLLFSPELMQSPIITFQATFCVLLFTLMFTLFFTPGGLPWAWARPRTIIPGPVTALLGVFTGSTPHSALSKLARTYHAEKLMAFSIGLTRFVISSEPETAKEILGSPGFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISALHLFSPKRITSSESFRSKVGLKMVEQVKKTMSENQHVEVKKILHFSSLNNVMMTVFGKCYEFYEGEGLELEGLVSEGYELLGVFNWSDHFPVLGWLDLQGVRKRCRCLVEKVNVFVGGVIKEHRVKRERGDCVKDEGAEDFVDVLLDLEKENRLSEADMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQREIDFVCGSSRLVSEADIPNLRYLQCIVKETLRVHPPGPLLSWARLAVHDVTVGGKHVIPKGTTAMVNMWAITHDERVWAEPEKFRPERFVEEDVSIMGSDLRLAPFGSGRRVCPGKALGLASVHLWLAQLLQNFHWVSSDGVSVELDEFLKLSMEMKKPLSCKAVPRVSV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2027 516 PANTHER CYTOCHROME P450 78A5 1 513 - -
Gso19g2027 516 SUPERFAMILY Cytochrome P450 62 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PANTHER CYTOCHROME P450 78A7-RELATED 1 513 - -
Gso19g2027 516 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 Pfam Cytochrome P450 63 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gso19g2027 516 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2027 516 Gene3D Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2027 Gso-Chr19 48857488 48859859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2027 1 513 Cytochrome P450 AT1G13710 63.532 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2027 K20619 - gmx:100790231 998.808