Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2024 ATGGGTTTTGGTAAATCACTGGATATGGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCTACAGATTCTGTCTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTGTACAGTCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTTGTGCTTTTTAATGCAATAAAAAGTTTTGACCTCAACAAAATTGACCCCAGAATTGGTTTGCATTTTATTGGCAACTTCTTGTATTTGTTCACCGCAAGCACCCTGCTTGGGGTCTTGGCTGGTCTACTTAGCGCTTACATTATTAAAACGCTGTATATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTTACTGTATTCTTCTGTGGGATTGTTATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATAACTACCAAACATGCTTTTGCAACTCTCTCATTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGGTTTGTTAGTGATAGGCCTAAAACATCTGTCGCTGTGAGTTCAGTATTATTGGGTCTAGTACTTGCTGGAAGAGCAGCCTTTGTTTTTCCCCTATCCTTCTTATCCAACCTCACTAAAAAGACGCAAAGTGAAAAAATAAGTTTCAGGGAGCAGGTGATAATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTACAATCAGTTCACCTTGTCGGGTCACACTGAACAGCGAACCAATGCCATCATGATCACCAGCACCATTACTGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGTTTTTGCTGCCTGTTAATCCCCTTCCTAAACGCAAAAACAGTATGGCAAATATAGATTCATCTAATAATTCCCCCAAATCAATCACTGTGCCCTTTCTTGGAGGCTCCCAAGATTCTGAAAACGAATTTGATGGCAGTGAAATTCATCGTCCAAGCAGTATTCGTGCCTTACTAACAACTCCAACACATACCGTTCATCAACTATGGCGTAAGTTTGATAATTCATTTATGCGTCCGGTTTTTGGTGGTAGGGGATTTGTTCCTGTAGCTCCGAACTCGCCAACCGCTCGCAACATTAATCAACAGTGGCATTAA 1233 0.4177 MGFGKSLDMGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNKIDPRIGLHFIGNFLYLFTASTLLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKTQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTEQRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVNPLPKRKNSMANIDSSNNSPKSITVPFLGGSQDSENEFDGSEIHRPSSIRALLTTPTHTVHQLWRKFDNSFMRPVFGGRGFVPVAPNSPTARNINQQWH* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2024 410 Gene3D - 8 60 - -
Gso19g2024 410 PANTHER SODIUM/HYDROGEN EXCHANGER 6 409 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso19g2024 410 Pfam Sodium/hydrogen exchanger family 7 305 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso19g2024 410 PANTHER SODIUM/HYDROGEN EXCHANGER 2 6 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2024 Gso-Chr19 48813569 48816392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2024 6 404 Antiporters AT3G05030 74.314 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2024 - - gmx:100787925 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2024 19 48813569 48816392 Gso19g2024 19 48813569 48816392 ECH
Gso19g2024 19 48813569 48816392 Gso3g2064 3 46008736 46013334 GST
Gso19g2024 19 48813569 48816392 Gso10g1446 10 40840045 40846501 PCT
Gso10g1446 10 40840045 40846501 Gso19g2024 19 48813569 48816392 PCT