Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2017 ATGGAGTGCAACAAGGATGAGGCTTTGAGGGCTAGGCAGATTGCTGAAAATAAGATGCAAGCTGGTGATTTTGAAGGGGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGAGATTCAGAACATTCTTCAGATCCTTGCTGTTTGTGAGGTTCACTGTGCTGCACAGAAGACATACTCTGGGTCAGACATGGACTGGTATGGAATTCTTAAGACTGAAAAGTCCGCCGATGAAGCAACCATAAAGAAACAGTATAGGAAGCTTGCACTGCTACTTCATCCTGACAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAAGCTAACAGAGTGTTGAGTGACCAAACGAAGCGTGCTTTGTATGACTTAAAGTTTGGAGTTCCTGTGGGAAATACAGCAACTAAGGTGCCACCTCGTCACCCAAATGGAAATGCTTCTGGGATGGGATGTGATGGAACTGCAAGAAATTGTCAGAACAGTTATTTTTCACAATACCAAGCTTGGAATGCATACCATCGGGATGATAATCAGACATTCTGGACATGTTGCCCTCATTGTAATACTAGATATCAATATGTCAAAACCATTTTAAATCATACCATACGCTGTCAACATTGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAGGATACTGGGCACCATTTAATAACCAGAAAGAGCCTCCAAAACATGCATCGTCTAAAGAAGCATCAAAAGGCTATGGTGGAAAATCTTCTGGTAGAGAACAGGAGGGTGTATCCATGTCAAAATGCTCAGCTGGTATTGGTGCCCATTCTAAAGTTGCAAAGAGAAGAGATGGTCATGTGGCTGCAGGAGTGACGAAGGCTGGTGTTGGGACATCCGACCCCACTAATTCCAAAGCCAAGGAATTGCGAGCCTCAACAAAGGTTGGACATAAGAGATCAAGGCAGTCAGCATCAGATGATGATAAGAAAGCTGCAAACGGTAAAGCCGTGAAAGATACCAAGGTTCAAGAAAATAGGGTTGATCCTAATAGGAGATCTTCAAGGAAAAAACAGCATGTTTCGTACACAGAAAATGATAAAGATGGTAATTTTGGGAATTCTTCCAAAAAGCCAAGACACCATAAATCCAGTAACAATAATCCAGCCTCTTTTACTGATGGTGTGGGTGGTCAGAATGGAGAGATAAGAAATAAAGCAAGTGCACCACCTGGAGAAACTATTTTAAGGAATAAAACCAAAGTTGAGCAGACAAATGTGCAAAGAAAGGAGGCATCCAACTCAGATCTTAATGATAGAAAGTCAAAAGCTGACAATTGTTCTCCACTCAAGTCAAATTTTCCTCCCACTTCAGAGATTTGCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGACAATACCGACAGTATGCCAAGATTCTATGCTCTTGTCAAGAAAGTGTACTCCCCTTTCAAATTGCGGATTACTTGGCTGGAACCTGACTCAGATGACCAAGGTGAGATTGACTGGCATGAAGCAGGTTTGCCTGTTGCTTGTGGTAAGTTCAAACTAGGTCATTCTCAGAGAACTTCAGATCGCTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAATTGACACTGGTACTTATCTGATATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTTTGATCCAGAAAAGCATTCAGAGTATCAATTTGAATATGTGGAAGTTCTATCTGATTTTGATAAAAATGTTGGCGTTAAAGTTGCTTATCTTAGCAAACTAAAAGGGTTTGTTAGTCTCTTTCAGCGAACTGTGCTAAACAGAATTAGCTTCTTTTGTATTTTGCCTAATGAGCTATATAAGTTCTCTCATCACATTCCTTCATATAAGATGACAGGTGCTGAAAGGCAAGATGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTAATAGTCTTTTTGAAGTCGGTGATCCTGGTGTTGTGAAGATGGATGGTGTCAATTGTTCGCACCACGAATACTCGAAGTGTAAAGTTGAAGAGGCAATGCCTAATGATAGTATTCACAAAGCAACACTGCGAGAGAGTATTGATTCTGGAAGAGTAGCACAAATCCTCAGAAGATCACCAAGGTCAAGTAAAAAAAGTATGGACAATGGTCAAGCAAGCACTAGTCAATATATAGTCAGAAAGGATGACATAAACATTGTCCACAGGGATGACAGTCCACCAGAGGGAAACACTGCTGCATCTCAGACTATTAAGAGGAAGGTCAAGACACCTCAGAAACATGAGAAAAATAATTATGAAGGAGAGGCATTGAAAGCTCGAAAGTCACCTAAAGATTTAGGCAAGAAAAATGCTCAAGGAGATGCAGGTGAATATTCAAGCAACAGTAAAAATGTGAAGGTTAGCAATATTCCTCAGTCGGTGGGAGCATCATGTTATGGCTTTAAGAAGGAAAAATCTGAAGAGATGTTTCGGTGTGGTCAGATATGGGCAATATATGGTGATAGGGATCATATGCCTGATACTTATGCTCAAATTAGGATAATTGAATGCACTCCTAATTTTCGATTGCAGGTGTACTTACTTGAACCCTGCTCACCACCAAATGACTTAAAAAGAACAACATCTTGTGGCACCTTTGCAGTTAAAGAAGCCAAATTACGGATGCTTTCTCTCTCTGCATTCTCTCATCAATTAAAAGCTGAACTCGTGGCAAATAATAGATATGAAATTTACCCTAGAAAAGGTGAGATTTGGGCTCTATACAAGGACCAGAACTATGAACAGACTTCTTCAAATCAGGGCAGAGGTGAATGTCATATAGTAGAAGTATTAGCAGATAATAACAAGAGTTTCCAAGTTGTTGTTCTGGTGCCGCATGGCAGCTCTCAGACAATTTTCAAGGCTCCTAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGCGACAATGTTCATCTCAGAGGGTGTTGGGAGCTTGATCCTTCATCAGTACCTGGCTGTTTGATACCAATAGACTGA 3177 0.4064 MECNKDEALRARQIAENKMQAGDFEGGLKFATKAQRLFPEIQNILQILAVCEVHCAAQKTYSGSDMDWYGILKTEKSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRVLSDQTKRALYDLKFGVPVGNTATKVPPRHPNGNASGMGCDGTARNCQNSYFSQYQAWNAYHRDDNQTFWTCCPHCNTRYQYVKTILNHTIRCQHCSKSFTAHDMGNHNVPPGYWAPFNNQKEPPKHASSKEASKGYGGKSSGREQEGVSMSKCSAGIGAHSKVAKRRDGHVAAGVTKAGVGTSDPTNSKAKELRASTKVGHKRSRQSASDDDKKAANGKAVKDTKVQENRVDPNRRSSRKKQHVSYTENDKDGNFGNSSKKPRHHKSSNNNPASFTDGVGGQNGEIRNKASAPPGETILRNKTKVEQTNVQRKEASNSDLNDRKSKADNCSPLKSNFPPTSEICCPDPDFSDFERDKAEDCFAVNQLWAIFDNTDSMPRFYALVKKVYSPFKLRITWLEPDSDDQGEIDWHEAGLPVACGKFKLGHSQRTSDRFMFSHQMHCIKGIDTGTYLIYPKKGETWAIFRHWDLGWSFDPEKHSEYQFEYVEVLSDFDKNVGVKVAYLSKLKGFVSLFQRTVLNRISFFCILPNELYKFSHHIPSYKMTGAERQDVPRGSFELDPAGLPNSLFEVGDPGVVKMDGVNCSHHEYSKCKVEEAMPNDSIHKATLRESIDSGRVAQILRRSPRSSKKSMDNGQASTSQYIVRKDDINIVHRDDSPPEGNTAASQTIKRKVKTPQKHEKNNYEGEALKARKSPKDLGKKNAQGDAGEYSSNSKNVKVSNIPQSVGASCYGFKKEKSEEMFRCGQIWAIYGDRDHMPDTYAQIRIIECTPNFRLQVYLLEPCSPPNDLKRTTSCGTFAVKEAKLRMLSLSAFSHQLKAELVANNRYEIYPRKGEIWALYKDQNYEQTSSNQGRGECHIVEVLADNNKSFQVVVLVPHGSSQTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAFQHSDNVHLRGCWELDPSSVPGCLIPID* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2017 1058 MobiDBLite consensus disorder prediction 746 761 - -
Gso19g2017 1058 SUPERFAMILY Chaperone J-domain 61 130 IPR036869 -
Gso19g2017 1058 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso19g2017 1058 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso19g2017 1058 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso19g2017 1058 PANTHER - 794 1054 - -
Gso19g2017 1058 PANTHER - 1 693 - -
Gso19g2017 1058 MobiDBLite consensus disorder prediction 229 449 - -
Gso19g2017 1058 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 794 1054 - -
Gso19g2017 1058 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 693 - -
Gso19g2017 1058 CDD DnaJ 67 120 IPR001623 -
Gso19g2017 1058 MobiDBLite consensus disorder prediction 794 819 - -
Gso19g2017 1058 MobiDBLite consensus disorder prediction 418 432 - -
Gso19g2017 1058 MobiDBLite consensus disorder prediction 311 376 - -
Gso19g2017 1058 MobiDBLite consensus disorder prediction 737 831 - -
Gso19g2017 1058 Pfam DnaJ domain 67 128 IPR001623 -
Gso19g2017 1058 SMART dnaj_3 66 123 IPR001623 -
Gso19g2017 1058 Gene3D DnaJ domain 53 137 IPR036869 -
Gso19g2017 1058 Pfam Domain of unknown function (DUF3444) 846 1034 IPR024593 -
Gso19g2017 1058 Pfam Domain of unknown function (DUF3444) 459 664 IPR024593 -
Gso19g2017 1058 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2017 Gso-Chr19 48772475 48778039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2017 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.478 3.85e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2017 - - gmx:100819284 2185.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2017 19 48772475 48778039 Gso19g2017 19 48772475 48778039 ECH
Gso19g2017 19 48772475 48778039 Gso3g2057 3 45960175 45964862 GST
Gso19g2017 19 48772475 48778039 Gso10g1442 10 40807118 40809234 PCT
Gso10g1442 10 40807118 40809234 Gso19g2017 19 48772475 48778039 PCT