Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1984 ATGGACGATCAAATCATTAAGATGCTTACAGAAAAGTTCAATCGATTCGGTATTAATTGCAATTTGAAGCCGTCATCAGAGTCACAGCCAAGCGTATCAACTGAAGCTTGTGATGAAACAGATAATGTATTAGCACAACTGAACAATGAGACCTCTGACAATATGGATGAGAGTAGTATACCCAATGGAATCCATGAATGTTCTCCTCGTGAGGATCATACACTCCCAATATTGAAGAAAATCCTTGACTTGAGTACTAAAATTCAGAATTTGAAGAAACAACATGTAGCCCTATCTAATCAAGTGAAACTCACAACTGAGTCATTTCCAGGCCTAGATGTTTTAAAGTCTGTTCAGCTTCTTGGTGCTGAATATGAAGTGTTGAAAAGAAAGTACGTAGAGGAGTCCTCTGAGCGTAGGCGGCTTTACAATGAAGTGATTGAACTAAAGGGAAATATCAGAGTTTTCTGTAGATGCAGACCACTAAATGAAAGTGAAATTGCAAATGGATCAGCAGTATCTGTTGTCAATTTTGAGTCATCTTCTGATGAGCTCCAAGTCATTTGCTCTGATTCTTCAAAAAAGCACTTCAAATTTGATTATGTATTCAGACCTGAAGATAACCAAGAGACTGTTTTCGAACAAACAATACCTATCGTCACATCTGTGTTAGATGGGTATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACCTTTACTATGGAGGGAACACCTCAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGAATATCTGAAGAGAGAAATGATGTAATAAAATATGAATTGTTTGTTAGCATGTTAGAGGTTTACAATGAGAAGATAAGAGATCTTTTGGTGGAAAATTCAGTTGAACCTACTAAGAAGTTGGAGATAAAGCAAGCTGTAGATGGAACCCAAGAAGTCCCAGGACTTATTGAAGCTCGTGTTTATGGAACAGTGGATGTGTGGGAAAAGCTGAAGTCTGGAAACCAAGCCCGATCTGTTGGATCCACTAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTGACTGTTTTAGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGATTTAGCTGGCAGTGAACGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTTATTTCAGCTCTTGCATCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACCCATATACTCCAGAGCTCTTTAGGAGGTGATTGCAAAACATTAATGTTTGTCCAGATAAGTCCAGGTGCAGCAGACTTAACAGAGACACTTTGTTCTCTGAATTTTGCCACACGTGTACGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAACGGACCTTACTGAACTGAATAAGTACAAGCAAATGGTAGAGAAGGTCAAACATGATGAGAAGGAAACTAGAAAATTACAAGATAACTTGCAGGCAATGCAAATGAGACTTACTACAAGAGAACTCATGTGCCGAAATCTTCAAGAGAAGGTTCGGGATCTTGAGAACCAGGTGACAGAGGAGAGAAAAATGAGACTGAAACAAGAAAGTAAATCACTTGCAGCAGTTTCAGCTCAACCTTCAACAATGTCGGAGTCAATAGCTGCTCGGAAAATCATGAAGAAGCCACCGCTCGATCCAAGACTGCCACTTAGAAGAATTACTAACATTTTACCTCCACCACCAGAGAGAAAGCCCTCATGCAGCTCTTCCATGGATGAACAGGAAAACATTGCTAGAACAACTTCAATTAACACACAAGACCTTGTGAAACCAAGAAGGGGGGTATCCATAGCTGTAAGACCCCCAACCACACCATCAACATCACGGACCCTTCAGCCTAGAAGGAGGCGTGTTTCTGTAGCTACACTATGTCCTGTCAGAACTCCACTCCGTTCCCCCACTCAGCAATCACCGAGAAGGCCCTCATGCAGCTCTTCCATGGATGGACAGGAAAACATTGCCAGAACAACTTCAATTAACACACAAGACCTTATGAAACCAAGAAGGAGGGTATCCATAGCTGTAAGACCCCCACCCCCACCATCAGCATCACAGGCCCTTCAGCCTAGAAGGAGGCGTGTTTCTGTAGCTACACTTTGTCCTGTCAGAACTCCACTCGGTTTCCCCACTCAGCAATCACCGAAAAGGAACCAAAGGGAAACTCAGTATTCAAGGTTGTTTGCCCCATTGCCAGAAGCTATAACCTCAGTCGAGACAGCATCACCAACTTTGATGAGGAGCAGCAGTAAGTTTGCCGGCAGCCCTAGGCATCAAAGACGCAAACCCTTAGTGTGGACTCCTCTCAAGCTGAAGGGCTTGAAAAATAGCAGCAGAAAGTCATTGGTTATACCATCTCGGCCTTTCTACTGA 2484 0.4255 MDDQIIKMLTEKFNRFGINCNLKPSSESQPSVSTEACDETDNVLAQLNNETSDNMDESSIPNGIHECSPREDHTLPILKKILDLSTKIQNLKKQHVALSNQVKLTTESFPGLDVLKSVQLLGAEYEVLKRKYVEESSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSAVSVVNFESSSDELQVICSDSSKKHFKFDYVFRPEDNQETVFEQTIPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPQHRGVNYRTLEELFRISEERNDVIKYELFVSMLEVYNEKIRDLLVENSVEPTKKLEIKQAVDGTQEVPGLIEARVYGTVDVWEKLKSGNQARSVGSTSANELSSRSHCLLRVTVLGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPGAADLTETLCSLNFATRVRGIESGPARKQTDLTELNKYKQMVEKVKHDEKETRKLQDNLQAMQMRLTTRELMCRNLQEKVRDLENQVTEERKMRLKQESKSLAAVSAQPSTMSESIAARKIMKKPPLDPRLPLRRITNILPPPPERKPSCSSSMDEQENIARTTSINTQDLVKPRRGVSIAVRPPTTPSTSRTLQPRRRRVSVATLCPVRTPLRSPTQQSPRRPSCSSSMDGQENIARTTSINTQDLMKPRRRVSIAVRPPPPPSASQALQPRRRRVSVATLCPVRTPLGFPTQQSPKRNQRETQYSRLFAPLPEAITSVETASPTLMRSSSKFAGSPRHQRRKPLVWTPLKLKGLKNSSRKSLVIPSRPFY* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1984 827 Coils Coil 81 101 - -
Gso19g1984 827 ProSiteProfiles Kinesin motor domain profile. 152 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 MobiDBLite consensus disorder prediction 638 653 - -
Gso19g1984 827 MobiDBLite consensus disorder prediction 776 790 - -
Gso19g1984 827 Coils Coil 493 555 - -
Gso19g1984 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 512 IPR027417 -
Gso19g1984 827 MobiDBLite consensus disorder prediction 666 703 - -
Gso19g1984 827 PANTHER KINESIN-LIKE PROTEIN KIN-14S 87 673 - -
Gso19g1984 827 PANTHER KINESIN-LIKE PROTEIN KIN-14S 671 820 - -
Gso19g1984 827 MobiDBLite consensus disorder prediction 581 607 - -
Gso19g1984 827 ProSitePatterns Kinesin motor domain signature. 376 387 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso19g1984 827 Pfam Kinesin motor domain 158 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 PANTHER KINESIN-RELATED 87 673 IPR027640 GO:0003777|GO:0007018
Gso19g1984 827 PANTHER KINESIN-RELATED 671 820 IPR027640 GO:0003777|GO:0007018
Gso19g1984 827 PRINTS Kinesin heavy chain signature 226 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 PRINTS Kinesin heavy chain signature 377 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 SMART kinesin_4 150 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1984 827 MobiDBLite consensus disorder prediction 631 731 - -
Gso19g1984 827 Gene3D Kinesin motor domain 147 519 IPR036961 -
Gso19g1984 827 Coils Coil 125 145 - -
Gso19g1984 827 MobiDBLite consensus disorder prediction 776 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1984 Gso-Chr19 48475159 48480031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1984 118 497 Calmodulin-binding Proteins AT5G65930 42.408 2.18e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1984 K10406 - gmx:100808603 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1984 19 48475159 48480031 Gso19g1984 19 48475159 48480031 ECH