Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1961 ATGAGTCGAGGAGGCGCAGTAGCAGCAGCGAAGGGAAAGAAGAAGGGTGCTACATTCACCATTGACTGTGCAAAGCCAGTGGAAGATAAGATCATGGACATTGCTTCTCTCGAAAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGACAGTATCACTGTTACCCGCGAGAAGACCAAGATCATTGTCACCTCTGACAGTAACTTTTCCAAACGGTATTTGAAGTACTTGACGAAGAAGTACTTGAAGAAACACAATGTGCGAGACTGGCTCAGAGTGATTGCTTCAAACAAGGATAGAAGTGTTTACGAACTGAGGTACTTCAACATTGCCGAGAATGAGGGAGAGGAAGAAGATTAG 378 0.4524 MSRGGAVAAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1961 125 Pfam Ribosomal L22e protein family 15 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gso19g1961 125 Gene3D - 6 125 IPR038526 -
Gso19g1961 125 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 125 - -
Gso19g1961 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1961 Gso-Chr19 48274922 48276333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1961 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.400 5.90e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1961 K02891 - gmx:100499714 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1961 19 48274922 48276333 Gso19g1961 19 48274922 48276333 ECH
Gso19g1961 19 48274922 48276333 Gso3g1997 3 45451100 45452464 GST
Gso19g1961 19 48274922 48276333 Gso10g1382 10 40228687 40229781 PCT