Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1958 ATGTTACGGTTGGGCCATCTTGTCCATCTATCCAAATTTCCCCATCCCGCAACTAATTTATTTATTTATTTTTCCTTTATTTATCTTCTTTCTCTGGCTCGAGCATCCAAAAGGGTTGTTTTTTTTTTTTATAAGAAGAAGAGGAGAGGGAAGATGATGATGATGACAATGGAGGGGATGATGGACAAGGGGGTGTTGGATGATGTGATAAGAAGGCTTCTGGAAGGGAAAGGAGGGAAACAGGTGCAACTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCAATTCTTCTCGACCTCCGTGCTCCCATCCGCATCTGCGGTGATATACATGGTCAGTACCAGGACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTACTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTTATCTCTTGAGGGGAAACCATGAAGAAGCAAAGATAAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACGGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGATGAGAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAATTAGAAAATTTAGATCAGATAAGAGAGATTCAAAGGCCTACTGAAATTCCAGATAGTGGCCTCCTATGTGATCTGCTTTGGTCTGATCCTGATGCTAGCATTGAGGGCTGGGCAGAGAGTGACCGAGGAGTTTCATGTACTTTTGGAGCTGATGTAGTTGCAGAGTTTTTGGATAAAAATGACGTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAAAGAAGATTAGTCACGATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAATGCTGGTGCGTTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATACTGAAACCCGCTGATAGAGCATCAGGAAGTGGTTCATCAAAAATGAATTTTAAGAAGCCACCCAAACTCGGAAAGATATAG 1128 0.4193 MLRLGHLVHLSKFPHPATNLFIYFSFIYLLSLARASKRVVFFFYKKKRRGKMMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLDQIREIQRPTEIPDSGLLCDLLWSDPDASIEGWAESDRGVSCTFGADVVAEFLDKNDVDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSGSSKMNFKKPPKLGKI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1958 375 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 53 369 - -
Gso19g1958 375 CDD MPP_PP1_PPKL 65 352 - -
Gso19g1958 375 SUPERFAMILY Metallo-dependent phosphatases 66 354 IPR029052 -
Gso19g1958 375 ProSitePatterns Serine/threonine specific protein phosphatases signature. 175 180 IPR006186 GO:0016787
Gso19g1958 375 SMART pp2a_7 84 354 IPR006186 GO:0016787
Gso19g1958 375 MobiDBLite consensus disorder prediction 355 375 - -
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 112 139 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 141 168 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 174 198 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 208 234 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 237 264 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 294 314 IPR006186 GO:0016787
Gso19g1958 375 PRINTS Serine/threonine phosphatase family signature 316 332 IPR006186 GO:0016787
Gso19g1958 375 Pfam Serine-threonine protein phosphatase N-terminal domain 66 110 IPR031675 -
Gso19g1958 375 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 53 369 - -
Gso19g1958 375 Pfam Calcineurin-like phosphoesterase 113 304 IPR004843 GO:0016787
Gso19g1958 375 Gene3D - 59 360 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1958 Gso-Chr19 48239288 48242712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1958 107 300 Calmodulin-binding Proteins AT5G63870 32.314 4.84e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1958 K06269 - gmx:100813792 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1958 19 48239288 48242712 Gso3g1994 3 45415109 45418082 GST