Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1945 ATGGCGAATACGATACCAGCATGTTATGAGGTATACATAACCAATCCCAGTCGAATCTGGCGAACTGATAAAGTCCTACAAACACAGCTTCCTGTTCTCGCTTTTCAAATTGCCTTTGTCGTTGTGTTGTCTCGTATTTTCTTCATTATCTTCAAACCTCTCCATCAAACTCGTCTCATTTCACAAATCTCTGTTGGTTTCCTACTAACTCCACCATTACTTGGGAGATTCACACCAATTTTTGAGTTCATATTTCCTGTAAATGGTGTCCTTAACGTTGAACTTCTTTCCCACCTTGGTCTCATATTTTATGCATTCCTTAGCGGTTTGGAGATGAACTTAGATACCATTCTACGAGTGAAAAAGAAGGCTGCTAGCATTGCGGTTGCTGGGATCGTCTTTCCGATGGTGTTGGCACCATGCTTATATGCTTTGTACCGAAAAATTTACGGTAGTAATGGAGTATTTCCCCTTGAAGAAGGTTCAGTTAATGCTTATTTACTTTGGACATTAATTCTCACCGTCACAGGTTTTCCTGTCATAGCTCACACACTTTCTGAGCTCAAGCTCATTTATACTGGTCTTGGCAAAGCTGCTTTAACAGCAGCCATGATCAGTGACACCTATGGTTGGATTCTTTTCACTTTACTGGTTCCATTTGCAATCAATGGTAAAGGAGCTATGTACACGGTGCTAAGCACCATATTATTCATTGTTGTATGCATCTTTGTGGTGCGTCCAATCATTCAACGGTTTATGGATAGCAAGACAGACAAAGATGAGTGGGAAGATAACGAATTACTATTTGTGGTGATGGGGGTTTTGGTTTGTGCAAACGTTACAGATATTCTTGGTGCACATGGCATTGTTGGGGCTTTTGTATTTGGATTGATTTTACCTCATGGGAAATTTGCCGACACGATGATGTCAATTTCAGATGATTTTACGGGAGGCTTTCTGGCGCCGCTCTTCTTTGCTGGCAATGGAATGAGACTTATCTTAACCTCAGTTTTCCAAGGAAATTGGCCCTTGACACTACTGATTATACTCTTGTTGTGTTCTCTAAAGATTTTAAGCACTTTATTCGCCACTTTCTTCTTTGGTATGCGCACTCAAGATGGTTTAGCCATAGGCTTGCTTCTCAATACCAAGGGCGCCATGGCACTGATTATGCTAAACATTGCTTGGGATAGAGCGATTTTTTTTGTACCTACCTATGCGGTTATTACTTCAGCTGTTCTTCTAATGACTGTAGTAGTATCTCCTGTCATCAATGCCGTCTACAGACCAAGAAAGAGATTCGAACAGAACAAGCTAAAGACTATACAAAAACTAAGAGTGGATGCGGAGCTTCGAATTCTAGCATGTGTCCACAATACTCGGCAAGCCACGAGCATGATCAGCATCATTGAAACTTTTAATGCCACTAGACTTTCCCCTATACATGTTTGTGCCATGTACCTTATTGAACTTACTGGACGTGCTGCTGCCCTTGTGGCTGCACATATAGAGAAGCCTAGTAGCCAACCCGGAGAACAAAATCTCACCAAATCACAGGCAGAGTTAGAAAGCATTGCCAATACATTTGATGCATTTGGAGAGGCATATGACGCTGTCAGAATTGAGACCTTAAATGTGGTGTCATCCTATGCAACCATTCATGAGGACATATACAACTCAGCAAATGAGAAACACACAAGCTTAATTATCCTTCCATTCCACAAACAATTAAGTTCAGAAGGTGCGCTTGAAGTAACCAATGCCGTATACAGAGATATAAACCAAAATGTAATGCAGCATGCCCCTTGCTCTGTGGGGATATTTCTTGATCGTGATTTTGGGTCAATTCCCAAAATGAACCTTCGTATTCTTATGCTCTTTGTTGGAGGCCCTGATGATCGTGAAGCCTTAGCTGTTGCATGGAGGATGGCAGGACATCCAGGAATCAAACTATCAGTGGTTCGGATTCTTTTGTTTGACGAAGCGGCAGAAGTAGATGGTTCAGTTCATGATGAAGCACGAGGGATATTGTCTTCTGTAATGGATAGTGAGAAGCAGAAAGAGTTAGATGATGAGTATATAAATTCATTCAGACTTACGGCAGTGAACAATAAGGAATCTATATCCTACTCAGAGATTGATGTCCATATTGGTGAAGATATTCCCAATATCCTTAATGAGCTAGAAAAAAATGGTTGCGATTTATACATAGTTGGACAAGGTAATTGTAGGAACTCTCGAGTCTTCTCAAATTTGCTAGAATGGTGTGAATGCTTAGAACTTGGAGTTATAGGGGATATTTTGGCGTCAAACAATTTTGGTTCGCGCTCATCTTTGCTAGTTGTTCAACAATATGGGTATGGAGGAATGGTTTTTGGAAAAAATCTCAACCAAAAGGCCACCAATAACGATGGATTTGAGTCACTTGTTGTGAAGACAGAGTAA 2445 0.4082 MANTIPACYEVYITNPSRIWRTDKVLQTQLPVLAFQIAFVVVLSRIFFIIFKPLHQTRLISQISVGFLLTPPLLGRFTPIFEFIFPVNGVLNVELLSHLGLIFYAFLSGLEMNLDTILRVKKKAASIAVAGIVFPMVLAPCLYALYRKIYGSNGVFPLEEGSVNAYLLWTLILTVTGFPVIAHTLSELKLIYTGLGKAALTAAMISDTYGWILFTLLVPFAINGKGAMYTVLSTILFIVVCIFVVRPIIQRFMDSKTDKDEWEDNELLFVVMGVLVCANVTDILGAHGIVGAFVFGLILPHGKFADTMMSISDDFTGGFLAPLFFAGNGMRLILTSVFQGNWPLTLLIILLLCSLKILSTLFATFFFGMRTQDGLAIGLLLNTKGAMALIMLNIAWDRAIFFVPTYAVITSAVLLMTVVVSPVINAVYRPRKRFEQNKLKTIQKLRVDAELRILACVHNTRQATSMISIIETFNATRLSPIHVCAMYLIELTGRAAALVAAHIEKPSSQPGEQNLTKSQAELESIANTFDAFGEAYDAVRIETLNVVSSYATIHEDIYNSANEKHTSLIILPFHKQLSSEGALEVTNAVYRDINQNVMQHAPCSVGIFLDRDFGSIPKMNLRILMLFVGGPDDREALAVAWRMAGHPGIKLSVVRILLFDEAAEVDGSVHDEARGILSSVMDSEKQKELDDEYINSFRLTAVNNKESISYSEIDVHIGEDIPNILNELEKNGCDLYIVGQGNCRNSRVFSNLLEWCECLELGVIGDILASNNFGSRSSLLVVQQYGYGGMVFGKNLNQKATNNDGFESLVVKTE* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1945 814 Pfam Sodium/hydrogen exchanger family 39 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso19g1945 814 Gene3D - 451 749 - -
Gso19g1945 814 Gene3D - 32 438 IPR038770 -
Gso19g1945 814 PANTHER CATION/H+ EXCHANGER 3 5 799 - -
Gso19g1945 814 PANTHER CATION/H + ANTIPORTER 5 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1945 Gso-Chr19 48149513 48152140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1945 8 785 Antiporter Super Family AT2G13620 37.374 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1945 - - gmx:100800072 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1945 19 48149513 48152140 Gso3g1985 3 45354378 45357407 GST