Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1943 ATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCTTTTTCAATGAAGAAAGGAGGAAAAAATGGGAAATGTGGAGGGAGGGAAACTGCTGATGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTAGCTCAGGCATTGTTCATGTCGATGGTTCAAACAACTTTGCTTCCGTTTTCTCAAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTAGCCCAAACTTCAATTGATCAGGCTATTGACGTAGAGGAAGAGAAAAGTAAACAATACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGAGCAATATCGCAAGATAGACTCGTTTTACAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTCATAGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGATGGAAGTTTAGTACCAGTTCAACTAACAATCGATTTCAAGCCCAATTTACCCCAGGAGGCAGAGAGAATAATTCAGTGCCAGGGGCGTGTGTTCTGCTTAGAGGACGAGCCAGGGGTGCATAGGGTGTGGTTACCGGATGAAGAGTCCCCGGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATCAAAGGGCATGGTCTAATTTCTGTGCCTGAGGTAACACACAGAAATATAAGTAGTAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTCTGGGATGTAATCTCTAATAAAGAAGCAGTGGATATTGTATCTTCAACAGCAGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCGGTGCATGCATGGAAACGCAAGAGACAGGGCATTGCCGTGGATGACATTTCAGCTATTTGCCTTTTCTTTCACTCTTCCCTTTCAACAGAGCAAGTTAGCCAGGTTGCCACATTAAAATAG 1110 0.445 MGHFSSMFNGLARSFSMKKGGKNGKCGGRETADAMAKEAKKNDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLAQTSIDQAIDVEEEKSKQYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKGHGLISVPEVTHRNISSRDQFVVLATDGVWDVISNKEAVDIVSSTADKAKAAKRLVECAVHAWKRKRQGIAVDDISAICLFFHSSLSTEQVSQVATLK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1943 369 CDD PP2Cc 59 353 IPR001932 -
Gso19g1943 369 ProSiteProfiles PPM-type phosphatase domain profile. 60 353 IPR001932 -
Gso19g1943 369 SUPERFAMILY PP2C-like 56 354 IPR036457 -
Gso19g1943 369 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 362 - -
Gso19g1943 369 Gene3D - 52 356 IPR036457 -
Gso19g1943 369 PANTHER ALPHABET, ISOFORM E-RELATED 1 362 - -
Gso19g1943 369 SMART PP2C_4 51 351 IPR001932 -
Gso19g1943 369 Pfam Protein phosphatase 2C 78 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1943 Gso-Chr19 48129666 48133030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1943 1 354 PP2C-type Phosphatase Gene Family AT3G05640 73.876 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1943 - - gmx:100808955 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1943 19 48129666 48133030 Gso3g1983 3 45337650 45341073 GST
Gso19g1943 19 48129666 48133030 Gso10g1373 10 40145513 40148944 PCT
Gso10g1373 10 40145513 40148944 Gso19g1943 19 48129666 48133030 PCT