Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1936 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCTATGAGGTGGCACCCGGACAAGTGGGCTCAGAATCCTGCAACCGCTGGCGAAGCCAAGCGGCGGTTTCAGCAAATCCAAGAAGCCTACTCAGCAGTTCTCTCCGATCAGTCTAAAAGGTCAATGTACGATGCGGGGCTCTACGATCCTTTGGAGGAAGAAGACCAAGACTTTTGTGACTTCATGCAAGAGATGATCTCAATGATGAACAATGTGAAAGACGAGGGGGACAGTTTGGAGGACCTACAGAGGATGTTCGTGGAGATGGTGGGGGAAGATCATGGCCATGGGATCGGCTTTGACTTGAACCAGGATCAGACGGCTGGGAAGCGAGGACGCGTAAATGGATCAAAGGGCAACGCGCCCAAGCGCAGCAACTCCCGCAGTTAG 495 0.5374 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWAQNPATAGEAKRRFQQIQEAYSAVLSDQSKRSMYDAGLYDPLEEEDQDFCDFMQEMISMMNNVKDEGDSLEDLQRMFVEMVGEDHGHGIGFDLNQDQTAGKRGRVNGSKGNAPKRSNSRS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1936 164 CDD DnaJ 12 71 IPR001623 -
Gso19g1936 164 SUPERFAMILY Chaperone J-domain 12 86 IPR036869 -
Gso19g1936 164 PRINTS DnaJ domain signature 14 32 IPR001623 -
Gso19g1936 164 PRINTS DnaJ domain signature 32 47 IPR001623 -
Gso19g1936 164 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gso19g1936 164 Pfam DnaJ domain 13 79 IPR001623 -
Gso19g1936 164 PANTHER PUTATIVE, EXPRESSED-RELATED 9 150 - -
Gso19g1936 164 PANTHER PUTATIVE, EXPRESSED-RELATED 9 150 - -
Gso19g1936 164 SMART dnaj_3 11 74 IPR001623 -
Gso19g1936 164 MobiDBLite consensus disorder prediction 131 164 - -
Gso19g1936 164 MobiDBLite consensus disorder prediction 143 164 - -
Gso19g1936 164 Gene3D DnaJ domain 2 104 IPR036869 -
Gso19g1936 164 ProSiteProfiles dnaJ domain profile. 12 82 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1936 Gso-Chr19 48058070 48059451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1936 12 80 C2H2 Transcription Factor Family AT1G74250 42.857 4.31e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1936 - - gmx:548049 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1936 19 48058070 48059451 Gso19g1936 19 48058070 48059451 ECH
Gso19g1936 19 48058070 48059451 Gso3g1977 3 45275324 45276656 GST