Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1935 ATGGAGTCAAAAAGACAATCTCAGCAGGAGGGTGATGAAAGGGGTGTTCAAATTCTTGTTCACGGCTCAAAACGGAGACGTGAAGATTCACAACAATCGGACACCTTCCGTATCGTTAGAAGTTTAAGGTCTCTGGTTCACTTAAAGAATGACATAGTGCCGTGCTTGGAAAATTTAGTTCAAAGATTGGTACGAGAGGAGTTGGAATGCCAACTTACAAGAACAATTAATAATCAGATTGGAATATCGGGAACCAAACCCTATCACCTGGTTTTTAAGAATGAATTGCCTGCTACAATTTATACTAACTCCAAGATCCAAGCTAAAGGCAACACTCCTCTCGAGGTTGCTCTTTTTGATATTGAATCTCAGTCTACAGTCACTGAGGGTTCACTGTCTTCGATCAAGATAGAGATATGTGTCCTTAATGGTGAGTTCGGTTCAAATGGCCTTGAAGATTGGAGTTCAGATCAATTTAACTCCAAAATCTTACCTCCAAGAGACAATAAAGGGCAGTTACTGAAAGGAGATACGATTATTACACTTGAAAATGGAGTTGGTTATATCACCAACCCTGAGATCACTGACAACTCAAGCTGGATAAGAACCCGACGCTTCAGGTTAGGAGCCAAGGTTGCACAATCAAATCTGAAAGATGCAATTAACATCAGGGAAGGTATAAGCAAACCTTTTATCGTCAAGGATGCCAGAGGAGAGAAGAAACACGACACTCCATCCCTCAATGATGAAACATGGCGTTTGAAACACATATCAAAAAGTGGTGAAGTTTGTCAGCGGCTGTCTAAGCACGGGATAAACACTGTTGAGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGCCAGAGAAATTTGGCAAGATTTCAAAAAAGAAACTGGAACAAATTATTAAGCATGCTCAGAAAGCAAAGCATGACAAGACTTGTGTTGCTGAAGCCACATTTGAAGGACAAAATTATCATTCAGGGAAGAATATTCTCATCTCCGACGAGAGGGAGCATTACAAAAATTTGAAGGATCCGGTACCAATTGAGACAGTAACACATGAGTTAGTGAAAGCATTGACACCAGTTACAGCACAATACAGTGCTCCATATCAAGATGTGCAACAGCTTGACTTTCCAATTGAAGAAATTTCTAGACTAATGGACTCACTAAACTGGTCAGTAGAGGGGCAGTTTGTTGATGGAAACATATGGCCTGTTGCAATTGATGATCAAAATTTAAGTTGCTCTATGATTCCACCTGAAGCAGAATGTAGCAATCGTTCCTCTTTTCCCAACTCTGCGATGTATAAATCAGACAAAGGGAAAAGCAAGATGGTTTGA 1353 0.4035 MESKRQSQQEGDERGVQILVHGSKRRREDSQQSDTFRIVRSLRSLVHLKNDIVPCLENLVQRLVREELECQLTRTINNQIGISGTKPYHLVFKNELPATIYTNSKIQAKGNTPLEVALFDIESQSTVTEGSLSSIKIEICVLNGEFGSNGLEDWSSDQFNSKILPPRDNKGQLLKGDTIITLENGVGYITNPEITDNSSWIRTRRFRLGAKVAQSNLKDAINIREGISKPFIVKDARGEKKHDTPSLNDETWRLKHISKSGEVCQRLSKHGINTVEDLLKEHETNPSSLPEKFGKISKKKLEQIIKHAQKAKHDKTCVAEATFEGQNYHSGKNILISDEREHYKNLKDPVPIETVTHELVKALTPVTAQYSAPYQDVQQLDFPIEEISRLMDSLNWSVEGQFVDGNIWPVAIDDQNLSCSMIPPEAECSNRSSFPNSAMYKSDKGKSKMV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1935 450 Pfam Calmodulin binding protein-like N-terminal domain 88 235 IPR046831 -
Gso19g1935 450 MobiDBLite consensus disorder prediction 1 33 - -
Gso19g1935 450 Pfam Calmodulin binding protein central domain 246 310 IPR046830 -
Gso19g1935 450 PANTHER CALMODULIN-BINDING PROTEIN 1 414 - -
Gso19g1935 450 PANTHER OS02G0177800 PROTEIN 1 414 IPR012416 GO:0005516
Gso19g1935 450 MobiDBLite consensus disorder prediction 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1935 Gso-Chr19 48044074 48052038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1935 52 318 Calmodulin-binding Proteins AT5G57580 37.011 2.68e-48 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1935 19 48044074 48052038 Gso3g1976 3 45268327 45274392 GST