Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1934 ATGGTATCAAAAAGGCAATCTGGTCAGAGGCACGAAGGCAGTGGCAAAGTTCCAATTCAGGAGCAAAAACAAACATCAATCAGTGGCCTTAGAAATGTGATCAACGCGCTATGGATGAGTGACCACTCTGCCTATTTGGAAAATTTTCTGCGAAGAGTGGTAAGCGAGGTGGTGGAACAAAAATTCGAGGACCAAGCTCATCTATTTCCAAGAAAAAGGGTTGGTGAGGCTGGCATATCCGGAGCCAAACCCTTTAAGTTGTGTTTTATTAATAAGCTGCCCGAAACAATTTTTACTCGGTCTAGTATAATAGCAGAAGATAAATCACCCCTTCAAATTGTCCTATTTGATGTTAGAACCCAGTCTGTAGTAAATGATGGTCCTCTCTCCTCACTAAAGATAGAGATCTGTGTCCTGGATGGAGAGTTTGGATCTCAAGGCAGTGAGGATTGGACTGAAGAAGAGTTCAATTCCAATATCTTACGCGAAAGAGAAGGTAAAGAGCCTCTATTGATTGGAGAGAGGTTTGCTAGTCTAAAAAATGGAGTTGGTTGTATACCTAAAATTGCCATCTCTGACAACTCGAGATGGCTAAGAAGCAGAAGGTTCAGCATTGGAGTCAAAGTTGTGCAACCAACTTCCAACGGAGAAAAGATTCAGGAGGGTAGAAGTAAACCTTTTGTGGTCAAAGATAACAGAGGAGAGTCCTACAAGAAACACTACCCTCCGTACTTGAAGTTGAATGATGATATATGGCGTTTGAAGAAAATTGCTAAGGAAGGAAAAATCCACAAGCAGCTGTCTTCGCGTGGAATTCACAATGTTAAGGATCTTTTGCGGTTGTACATAACCAACGAACCTTCATTATATGAAATGTTTGGAAATATTCCAAAGAAGTCATGGTTAGTAATCACTGAACATGCCAAAGCCTGCGTGATAGATGATTACCAGCTTTACAGCTATCATTCACAAGAACTGCAAATAGGCTTGCTATTCAATTCCATCTACATCCTTGTGGGAGTGACATTTGATTGGCAAAATTATTACTCACCAGATACTCTCACCCCAAGAGAAAAGCATTTGGTGGAAATAGTGAAGCAGCAAGCTTATAAAAACGTCAACAATTTGGAATTGATTAATGACACTAAATTGAACTATTTAAATCTAGCTGCATGTCTAAAAGCAAGAGAATCTGATCCTCCAGATCAAGGTCTGCACCATATTAACATCTCAACTGTACAAGGTATATTTAAAGATCAATCAGTAACATTCCCCGGTTGTGGTCAACCATCTATCTCTCCTTCATATACTGATGAAGGAATGCATGACCACCAAGTTTATGCTGATCCACTGTCAGGCATAACAGAAATGTCAAAAAACAGTCATCTGTTAGATGAACTTTCCTCTGAAATGTACACTGAAGAGGATAGTTGTCACCTTAATGGATCTCAATTTCCATTCGTGCGAGGCGGTTATTCAACAGAGAATGAATGGTCAGAGATTCAATTCATAGATGATTGCCCTTCTTACACAACATGGGAACCAGAAACTGGCATTTTCTTGGGTTCTCCTGTTGGAGCAGAATTTAGCAGCTATTCGACTTTCATCAATTCTGATGAGGATACATCAATCAGTGGCAAAACCAAAGCAGTGTGGTATAAGATTCGTGTTGCTCTCAAATGGGTCATATCAGTGAAAAGGGATGCAGCTGCCAGAAAGAATGCTCAGCTGTTTTACTATAACTATTAG 1749 0.4008 MVSKRQSGQRHEGSGKVPIQEQKQTSISGLRNVINALWMSDHSAYLENFLRRVVSEVVEQKFEDQAHLFPRKRVGEAGISGAKPFKLCFINKLPETIFTRSSIIAEDKSPLQIVLFDVRTQSVVNDGPLSSLKIEICVLDGEFGSQGSEDWTEEEFNSNILREREGKEPLLIGERFASLKNGVGCIPKIAISDNSRWLRSRRFSIGVKVVQPTSNGEKIQEGRSKPFVVKDNRGESYKKHYPPYLKLNDDIWRLKKIAKEGKIHKQLSSRGIHNVKDLLRLYITNEPSLYEMFGNIPKKSWLVITEHAKACVIDDYQLYSYHSQELQIGLLFNSIYILVGVTFDWQNYYSPDTLTPREKHLVEIVKQQAYKNVNNLELINDTKLNYLNLAACLKARESDPPDQGLHHINISTVQGIFKDQSVTFPGCGQPSISPSYTDEGMHDHQVYADPLSGITEMSKNSHLLDELSSEMYTEEDSCHLNGSQFPFVRGGYSTENEWSEIQFIDDCPSYTTWEPETGIFLGSPVGAEFSSYSTFINSDEDTSISGKTKAVWYKIRVALKWVISVKRDAAARKNAQLFYYNY* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1934 582 Pfam Calmodulin binding protein central domain 247 311 IPR046830 -
Gso19g1934 582 PANTHER OS02G0177800 PROTEIN 1 579 IPR012416 GO:0005516
Gso19g1934 582 PANTHER CALMODULIN-BINDING PROTEIN 1 579 - -
Gso19g1934 582 Pfam Calmodulin binding protein-like N-terminal domain 85 232 IPR046831 -
Gso19g1934 582 MobiDBLite consensus disorder prediction 1 22 - -
Gso19g1934 582 Pfam Calmodulin binding protein C-terminal domain 317 377 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1934 Gso-Chr19 48037579 48041588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1934 46 573 Calmodulin-binding Proteins AT4G25800 31.453 1.93e-81 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1934 - - gmx:100805759 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1934 19 48037579 48041588 Gso19g1934 19 48037579 48041588 ECH
Gso19g1934 19 48037579 48041588 Gso3g1975 3 45264297 45267483 GST