Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1933 ATGTCTGGAAAACGAGAAATGGAGATGGAGAAAAAACGTTCCAAAGGAAGCTTCCTCAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTCTGGAACGATCCTGAGGTTCCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACCGAAGTCACAGCTCACTAGGAAAAAGGTGGATGAAATTGGAGAAAGTCCAAGTAACATTCAAAGTTGTGATTTCGACAGCACCCTTTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGACTTGTTGCCAGCTGCGGCAGTCACTGAGCTCTCCTGCACTTCATTGTATGGCTCTAAATCTCATGGAGCTTCTCATTGTAATGAGGGTGCTCTTCACTCAGCGGATGACTTTTGCCCTGCAGACTACATAAACACACTGCTTAAGCCAGAGAAGTCTTCTTTGGATGCCATGGAATCAAGGGCACGAAAAGTGGAAAGCCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAAACCATTCCAGTTACTCACAATAAACTGTTGTCTCCTATCAAGAGTCCTAGTATTCTGCCACCAAAAAATGCAGATCACGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATTTGAGGAATAGAACAACATCAACCGAGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTTGAAGCTGCACAATATGCATCCATGCCTGGAAAGCTTGTGAATCTGAGCAATGCCTATCCTGCAAATGGCAGGCTTAGTGAGAGGAACAGTAATTTGTATAAATGCACTTCAGCAGTCAAGGGTTCAAGAGGTTCAGAAAAGAATAGTTCTTGCCATTTAGCCAGTAAAGGAAAATCAGTTTCACTTACAGCCAAAAACAATGCTCATAGTAGAGATACATTGATTTCAAATGATGATATTCCATGCATGAAACAGAAAGAGAAGAATGAGATAAAGTCAAATCAACTCTCAAGGAGCCACAAACCTAGTACACAAAAAACTATGCAGCAGAGGCCTTGCTCAAGCCGGAATAGCAATGTGCTTGGGCAGAACAATCAAAAGCAAAATAGCATGACTGCCAAGGGTAAATCAACTTCAAAAATAGATTCTAATAAGCTAACAACACGAGCTTCATCTTCAGAAACTTCTGGAATAAGGAAGACAACGAACAAGGGTACTATAACTGCAAATATTCAACCTAAAAGGTCAAGCACTAGGGCAACTGACAACCAAAAGCAGTTTTCAAGATCCAAAACAGTGAGTATTTCCCAGAAGAAAAAGATTAGCAAAGATGTTCATGAGGGAAGAGGTCCTGATAATGCAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACGGATGGAAGTTTTGATCAGGATGCATTTAACATGATAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAACTATGCCTGAGTCATCATCCTCTACCGAGCAAGTGATGGGAACCAGAAATAGAATTGATGTCAACTCTCTTGGGCATAGTGATAATCTTTATCCCAAAAAATTATCATTATCTCCGCCAGGGCAACCTATGATAGATAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTGCAAGAATTGGCATCTAGAATTAACTTACCTCAATGTACCTTGGCCAGAGAGGGGTCTTCTACTGGTTTGAGATCTAGTGTGCAAGATCAAGTTCCCAGTGTGTCAAGCACCACGCCTAAGGAACAAAACAAAAGCTTTTGCAGTGACCTGTCTAGTGATAAACTGGATAGCATGCATAACTCTCATTATTGTTCAAGTGATGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATCAGAAGTAAGTGAAGATCCTAGCTGCAGTAGCAACAGTGAAAGAGGAAATGATCTAGTTTGTTGGCATTCCACTGCTGTTGCAGGTTTTGAAACTCCTTTTGTCTGCGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAGTTTATTCATCCACACAAGATGAAGAAGTATCTAGTTTTTCCCAGATAAGCGAACCTGTATCACTTGAAAGTGAGGTGAAAGGGTCAGAGGAAAGCTCTTCCCCATTGGGGGGCGGAAAAATGACCATCAAACAAATAAGTGAAATATCAAATTCTGTTGATTTTAAAAGATCAAGGAACACGGTACTTGAATACGTACATGATATTCTTTGCAATGCAGAGTTCATGGCAGAAGAATTTGTCATGGGTCAAACAAGTGCACTCATAATGCCAAATGTCTTTGATCTGTTGGAGAATCAGCATTATGGAACAGAAAATTTCGGAGAAGAGTACTCTATGCTTGAAAGGAAGGCTATATTTGACTGTGCGAGTGAGTTGCTGGAGTTGAGATGTAAGGAAGCTTTTGTTGGAACATGCAAAGCATGGTCTGGATGGATGATGTTAATTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAATTGCTGGGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACCAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGATTGAGGGGGACATACTATCTCATTTGATTAATGAATTGGTTTCAGATTTGTTACTTGTCTAA 2754 0.4089 MSGKREMEMEKKRSKGSFLSLFDWNSKSRKKLVWNDPEVPKQGKENVENLPKSQLTRKKVDEIGESPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDLLPAAAVTELSCTSLYGSKSHGASHCNEGALHSADDFCPADYINTLLKPEKSSLDAMESRARKVESLPIKRFQTEMLPPKSAKTIPVTHNKLLSPIKSPSILPPKNADHVMEAAAKIIEASPRPYLRNRTTSTEPSSVPLRILNLKERFEAAQYASMPGKLVNLSNAYPANGRLSERNSNLYKCTSAVKGSRGSEKNSSCHLASKGKSVSLTAKNNAHSRDTLISNDDIPCMKQKEKNEIKSNQLSRSHKPSTQKTMQQRPCSSRNSNVLGQNNQKQNSMTAKGKSTSKIDSNKLTTRASSSETSGIRKTTNKGTITANIQPKRSSTRATDNQKQFSRSKTVSISQKKKISKDVHEGRGPDNAVNNFGSKSIKCNFTTDGSFDQDAFNMIESKDVISFTFTSPLRRTMPESSSSTEQVMGTRNRIDVNSLGHSDNLYPKKLSLSPPGQPMIDSDALSVLLDKKLQELASRINLPQCTLAREGSSTGLRSSVQDQVPSVSSTTPKEQNKSFCSDLSSDKLDSMHNSHYCSSDDPVLNMNQQLQTSEVSEDPSCSSNSERGNDLVCWHSTAVAGFETPFVCESYLDSEDSAYGSTVYSSTQDEEVSSFSQISEPVSLESEVKGSEESSSPLGGGKMTIKQISEISNSVDFKRSRNTVLEYVHDILCNAEFMAEEFVMGQTSALIMPNVFDLLENQHYGTENFGEEYSMLERKAIFDCASELLELRCKEAFVGTCKAWSGWMMLIQRKSWMAEELYKELLGFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEIEGDILSHLINELVSDLLLV* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1933 917 MobiDBLite consensus disorder prediction 703 735 - -
Gso19g1933 917 PANTHER DUF4378 DOMAIN PROTEIN 7 917 - -
Gso19g1933 917 Pfam DUF761-associated sequence motif 83 108 IPR032795 -
Gso19g1933 917 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 7 917 - -
Gso19g1933 917 MobiDBLite consensus disorder prediction 347 446 - -
Gso19g1933 917 Pfam Domain of unknown function (DUF4378) 758 909 IPR025486 -
Gso19g1933 917 MobiDBLite consensus disorder prediction 338 471 - -
Gso19g1933 917 MobiDBLite consensus disorder prediction 584 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1933 Gso-Chr19 48021348 48026033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1933 9 915 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.313 1.58e-97 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1933 - - gmx:100804688 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1933 19 48021348 48026033 Gso19g1933 19 48021348 48026033 ECH
Gso19g1933 19 48021348 48026033 Gso3g1973 3 45242942 45247589 GST
Gso19g1933 19 48021348 48026033 Gso10g1357 10 39958191 39962690 PCT
Gso10g1357 10 39958191 39962690 Gso19g1933 19 48021348 48026033 PCT