Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1925 ATGGTTTGCGAGGAAGAATTGTTGATAGAAAAAGTGTGCTCGCTCTATGAACAAATCTCAAGCCTCGAGAGTCTCAAACCTTGCAAGAATGTCGACATGCTGTTCACCAAACTAGTCCTGACATGCATACCCCCAAGCCCAATCGATGTCACAAAGCTAAACAAAACCGTTCAAGACATTCGATCCCACCTTATAAAACTATGTGGTGAAGCCGAGGGACACTTAGAGAGCCACTACTCAACCATCCTAGGCTCATACGACAAACCCCTTAACCACCTTAATATTTTCCCCTATTATTCTAACTACCTCAAACTTGGTCATCTCGAGTTCACTATCCTTAGCCAACACTGCACCCATGTTCCCACCAAAGTTGCCTTCGTGGGCTCGGGGCCCCTTCCTCTTACCTCAATTGTGTTGGCATCGAACCACTTACCTTCCACCACTTTCCACAACTATGACATGGACCCTTTAGCCAATTCCAACGCTATGCGCTTGGTTTCCTCTGACCCTGACTTGTCCAAGCGCATGTTTTTCCACACCAACGACATATTGGAAGTGTCGAACGCTTTGAAGGAGTACGAGGTTGTTTACTTGGCAGCACTTGTGGGCATGGACAAGGAGGGGAAGAATCGAATCATTGATCACTTGGGCAAGCACATGAACCCTGGGGCACTTCTTATGCTCAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGAGCCTTGTGATTTTCGAGGTTTTGAGGTTCTCTCTGTGTTCCACCCCTCCGATGAGGTCATCAACTCGGTTGTCATAGCACGTAAATTATATCACTCTCTTGAGCAAGGCCTTGTTGGCTCTATGATCCTACCTAACAAGTGTTCCGAGATTCAAGCCTTCAACCCTCTCAACCATGGGAACATGATTGAGGAATTGGCCGTTGAGGAGCAACTCTTGTGA 948 0.4736 MVCEEELLIEKVCSLYEQISSLESLKPCKNVDMLFTKLVLTCIPPSPIDVTKLNKTVQDIRSHLIKLCGEAEGHLESHYSTILGSYDKPLNHLNIFPYYSNYLKLGHLEFTILSQHCTHVPTKVAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSDPDLSKRMFFHTNDILEVSNALKEYEVVYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPCDFRGFEVLSVFHPSDEVINSVVIARKLYHSLEQGLVGSMILPNKCSEIQAFNPLNHGNMIEELAVEEQLL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1925 315 PANTHER NICOTIANAMINE SYNTHASE 3 1 314 IPR004298 GO:0030410|GO:0030418
Gso19g1925 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Gso19g1925 315 Pfam Nicotianamine synthase protein 5 272 IPR004298 GO:0030410|GO:0030418
Gso19g1925 315 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Gso19g1925 315 PANTHER SYNTHASE, PUTATIVE-RELATED 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1925 Gso-Chr19 47977173 47978428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1925 1 312 Nicotianamine Synthase Gene Family AT5G56080 62.112 1.28e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1925 K05953 - gmx:100803630 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1925 19 47977173 47978428 Gso19g1925 19 47977173 47978428 ECH
Gso19g1925 19 47977173 47978428 Gso3g1964 3 45182304 45183557 GST