Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1896 ATGGCCGACGATAGCACAGCTACCTGCATCGACATCCTCCTTGCCATCATCCTTCCTCCTCTTGGTGTCTTCCTCAAGTATGGCTGCAAGGTAGAATTCTGGATCTGTTTGGTGCTTACCCTTTTTGGCTACATTCCTGGAATTATCTATGCTGTCTATGCTATCACCAAGTGA 174 0.4713 MADDSTATCIDILLAIILPPLGVFLKYGCKVEFWICLVLTLFGYIPGIIYAVYAITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1896 57 PANTHER BNAC03G34420D PROTEIN 3 57 - -
Gso19g1896 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 57 IPR000612 GO:0016021
Gso19g1896 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Gso19g1896 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1896 Gso-Chr19 47686908 47688109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1896 5 57 RCI2 Gene Family AT3G05890 81.132 2.47e-27 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1896 - - gmx:100792684 113.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1896 19 47686908 47688109 Gso3g1933 3 44877295 44878791 GST