Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1887 ATGGGGATTCTGGTTCCGCTTTTCTTCCACGTCGTCGCTTTCATTTGCACCGTTGCAGCTATCGCTTTGGCCGTTCTTCACATTTACAGGCACCTTCTCAGTTACACCGAGCCCACTTATCAGCGTTACATCGTTCGGATTATTTTCATGGTCCCGGTTTATGCACTAATGTCATTCTTGTCCCTTGTAATACCCGAGAGTTCAATCTATTTTAATTCCATTCGGGAAGTCTATGAAGCTTGGGTCATTTATAATTTTCTGTCACTGTGTCTGGCATGGGTTGGTGGTCCTGGAGCAGTTGTAATAAGTTTGAGTGGTCGAGTTCTGAAGCCATCATTTTGTCTGATGACTTGTTGCTTTCCTCCTATACCGCTGGATGGGCGTTTCATACGTAAATGCAAGCAAGGATGTCTGCAGTTTGTGATTTTGAAGCCCATTTTAGTTGTTGTTACACTTATACTTTATGTAAAGGGGAAGTATAAGGATGGAAATTTCAATCCAAAGCAGTCATACTTGTATCTTACGATCATTTATACGATCTCGTATACAATGGCACTCTATGTGCTTGCTTTGTTTTATGTGGCATGCAAGGATCTGCTTCAGCCATTCAATCCAGTTCCAAAGTTTATTATAATAAAATCTGTTGTATTCTTGACTTATTGGCAGGGCGTGTTATTCTTCCTTGCTGCAAAGTCAGGATTCATCGAGGATGCTGATGAAGCTGCCTTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTTGCTGCCGTAGGCCTCTTTTACGCATTTCCATACAAAGAATATTCCAGTGCTAATATAGGTGGATCCCGTGGTGTGACAGCTAGCCTTGGGCATGCTTTGAAGTTAAATGATTTTTACCATGATACAGTCCACCAGTTTGCACCAACGTATCATGAATATGTTCTCTATAATCACAGCGAAGGTGAGGAGGGAACTAAGAAGTACAGGTCACGAACTTCTGTTCCAATTGGCCCAGAGATGGATTCTGTAAGAAATAAACATATGTCTGGAGACAAGTTAGATGACATACAGCTCTCAAGTTTGTCTTCTACCAGTAGCACTCCTTCAAATTCTGGTTCCATTCCTGATGCTTCAAATTCTGATGCAACGAATTCTTCCTTGCTTGTGGATATGTCCAATTCTGTTTCGGAACCATACGACTTGACCTTCATTGACTTGGATGTATCCAGTTACCCTGAAGAGGTTCCTGCGGCTGATAAAGCTGGTGGTAGGTGA 1260 0.4175 MGILVPLFFHVVAFICTVAAIALAVLHIYRHLLSYTEPTYQRYIVRIIFMVPVYALMSFLSLVIPESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISLSGRVLKPSFCLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVVVTLILYVKGKYKDGNFNPKQSYLYLTIIYTISYTMALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIEDADEAALLQNFIICVEMLVAAVGLFYAFPYKEYSSANIGGSRGVTASLGHALKLNDFYHDTVHQFAPTYHEYVLYNHSEGEEGTKKYRSRTSVPIGPEMDSVRNKHMSGDKLDDIQLSSLSSTSSTPSNSGSIPDASNSDATNSSLLVDMSNSVSEPYDLTFIDLDVSSYPEEVPAADKAGGR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1887 419 PANTHER BNAC02G48440D PROTEIN 7 416 - -
Gso19g1887 419 Pfam Organic solute transporter Ostalpha 11 269 IPR005178 -
Gso19g1887 419 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 7 416 IPR005178 -
Gso19g1887 419 MobiDBLite consensus disorder prediction 319 342 - -
Gso19g1887 419 MobiDBLite consensus disorder prediction 354 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1887 Gso-Chr19 47589363 47594157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1887 - - gmx:100790047 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1887 19 47589363 47594157 Gso3g1922 3 44762945 44767009 GST
Gso19g1887 19 47589363 47594157 Gso10g1298 10 39030227 39034301 PCT