Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1877 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTCTGGTGCCATTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCATTCCTTTTGTTATGTGAGGCCATCTATTTTTGAATCTCCTGCCATTACCCCATCAAACTCTGAGAGGTTTACTGTTGATTCTAGTACCCTTGATTCTGAGACATTGAGTGGTTCGTTTAGGCATGAGAGCATTGAAGAGAGGCCTGGTAAGAATGTTGCGGAAACCACGTTCAAAACAATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAACGCATTACTAGCTAGCGATGTTCTGGAGCCTGCTGCATCGTTTGAGGGAACCTCGTCGTTCGCTGCAATCCCTTTGCAGCCTGTTCCCCGGGGTTCTGGACCTTTGAACGGTTTCATGTCGGGACCTCTGGAGAGATTTGCTTCCGGTCCGTTGGATAAGGGCGGCGATTTCATGTCTGGGCCGATTGAGAAGGGCGTTATGTCGGGTCCTCTTGATGCCACTGATAAGTCCAACTTTTCAGCACCACTTGCCCGTGGTCGTCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTAAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCGAGGCACTCCATGGGTGGCAGTTGGGTGCAGCGATTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGACCGGAAGTTTCTAGAAACTGTGCTGAAGTTGGATCGTCCGAATTGGAGTATAAACATACACAAAATTTGCAGTGGGCACATGGTAAGGCTGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTCATAGACAAGGAATTAGAAGGATTGCTCTGGGATTATGAGGATAATCCCGTTGATCCACTTAAACCTGAAGTCCTTGAAAATGGAAATGATGTAGTTGCTCTAGAATGTGGTAGGGAGGAAATGTCAGATGCTCATAGCATTTCAAATGAAGAAAGTTCTTGCTGTTTAGAAAATTCTTGTCCCATAATGGTCAAGGATCAATCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAGTTAAGGTAAATATTGAACAGAAAAATTGTGGAAGTCCCAGTATTGTACATACTGTTCCTGCATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAGGTGTCAGAACAAGGCAAGGATTCTGTGGTTCCTGCGGAAATAGCACAAGAGAGGCAGATGAGATTCTGCTCACCTGATGGTAAAGAGGATAGATCTAGACATCCAGATGAAGGTCCCACTACTTCGGGGGAAAATGGAGGTGCTGGGTTTAATTCGACCTACCAGGAGCCAATAGCTCCTTTTTCCGTTTCAGGACAAAGGCAGAATTCAAGAAAGTCATTCATTGGTACAAAAATCAGAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTGTTGACCAGAAATTAGTTGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAAATCATAATGCAGTTTTAAGAGCAATGGCTAGGGCTCTTGAAAGAACAGAGGAGGAATACCTGAAAATGGTGGAGAATAATATGGACAAAAATCCAGAGCTTGCCTTGATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTTATGAACCTTGGAGATAGTCGTGTAATTTTGGCTCAAGAACGGCCAAATGATCGTCATCCTAATCCGTGTCTTATCAAAGATGACATGAGGCATAAGAATCGATCTAGAGAGTTGTTAGTGGGCATGGAGTTGGATAGAATTTCGGAGGAGTCCCCAGTGCACAATATAAATAAGCATGTTAACAAGATAAACAAAAACAGAGAGATATCCATGTGCAGACTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCACAGCACAAGCATTGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTCAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCGTCTTTTAATGAACCGCTACTGAAGATGTTTCGAGTTGATTATGTGGGGAATGCTCCTTACCTAAGTTGTGCTTCTTCTGTCCTTCATCACCGACTTTCCTCAAGTGACCGGTTCCTGGTGCTCTCCTCCGATGGGCTTTACCAATTTTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTTCCTGAAGGTGATCCTGCACAATACCTTATCGCAGAGCTTCTCTTCCGTGCGGCTAAAAAGAACGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTTTCTGTTATGGTGGTTTCGTTGGAGGGAAGGATTTGGAGATCATCGGGATAA 2664 0.4377 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVAETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGDFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSRHSMGGSWVQRLFLHPVSQLAWNSKEAKFRPEVSRNCAEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPEVLENGNDVVALECGREEMSDAHSISNEESSCCLENSCPIMVKDQSSNSEIVEVNAEVKVNIEQKNCGSPSIVHTVPASVPIGQLSGQGRRSVRLYELLQMESWNEQVSEQGKDSVVPAEIAQERQMRFCSPDGKEDRSRHPDEGPTTSGENGGAGFNSTYQEPIAPFSVSGQRQNSRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREETCVDQKLVESSGPIRICKSGVNHNAVLRAMARALERTEEEYLKMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPCLIKDDMRHKNRSRELLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLKMFRVDYVGNAPYLSCASSVLHHRLSSSDRFLVLSSDGLYQFFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1877 887 PANTHER PROTEIN PHOSPHATASE 2C 32 11 887 - -
Gso19g1877 887 SMART PP2C_4 271 876 IPR001932 -
Gso19g1877 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Gso19g1877 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
Gso19g1877 887 MobiDBLite consensus disorder prediction 498 524 - -
Gso19g1877 887 PANTHER PROTEIN PHOSPHATASE 2C 11 887 IPR015655 GO:0004722|GO:0006470
Gso19g1877 887 MobiDBLite consensus disorder prediction 476 492 - -
Gso19g1877 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Gso19g1877 887 MobiDBLite consensus disorder prediction 475 524 - -
Gso19g1877 887 Coils Coil 585 605 - -
Gso19g1877 887 CDD PP2Cc 584 878 IPR001932 -
Gso19g1877 887 Gene3D - 248 414 IPR036457 -
Gso19g1877 887 Gene3D - 520 884 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1877 Gso-Chr19 47489189 47496164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1877 1 887 PP2C-type Phosphatase Gene Family AT2G46920 63.978 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1877 - - gmx:100786856 1774.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1877 19 47489189 47496164 Gso3g1913 3 44679818 44686877 GST