Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1862 ATGGCAATGTCCGTGATAAGAACAAAAGGAGGCCTAGTTAAGCCAGCAGAGGAGACTCCCTTGAGCACAGTTCTGGACCTATCAGCCATCGATAGATTACCTGTTCTAAGATGCAATGCGAGAACCTTGCACGTGTTCAAACACGGTGGTCCTGAAGCGCCAAGGGTCATAAGAGAGGCCTTGTCCAAAGCACTGGTTCCGTATTACCCTCTTGCAGGAAGACTCAAAGAATCCAAACCAGGGTGCCTTCAAATTGAATGCTCTGGTGACGGCGTGTGGTATGTTCAAGCATCTTCTGATTCCACCCTTCACTCTGTCAATTTCTTTGATGATGTTCACTCTATTCCTTATGATCATCTTCTTCCTGATGCTATTCCTGAGACCCAATGCATCGACCCCCTCGTGCAAATGCAGGTAACACAATTTGGTTGCGGGGGTTTCGTGATAGGCCTCATATTCTGCCATAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAATCGGGGAACTAGCAAGGGGACTCGAAAAACTCAGCATTGAGCCAGTGTGGAACAGAGACTTCTTTCCATCTCCTCAAACACCCCAAGAAACTGCATTGCCACCAACACCACCTACAATGCCAGATTACAAGCTAGAACCTGCCAACATAGATATGCCCATGGATCGAATCAACAGTGTGAAGCGAGAATTTCAACTAGCAACTGGACTCAATTGCTCAGCCTTCGAGATTGTAGCTGCAGCATGTTGGACCACTAGAACAAAGGCCATTGATCAATTCGAGGCCAACACTGAATTGAAGTTAGTGTTCTTTGCAAATTGTCGCCACCTCTTGGACCCTCCCCTACCCAATGGTTTCTACGGCAATTGTTTCTTCCCAGTGACAATCACAGCTTCGTGTGAGTCACTTAGAAATGCTACAATTGTTGGTGTGGTGAAGCTGATAAAAGAAGCCAAGGCCAAGTTGCCCGTGGAATTTGACAAGTACTTGAAGGGTGAGCATTTGAAAAACGGAGAGGACCCTTTTGCGCCTCCGCTCACATACACCACTCTCTTTGTATCTGAGTGGGGGAAGTTGGGATTCAACCACGTGGACTACCTGTGGGGCCCACCCGTCCACGTGGTTCCCATTCAAGGATCCAGCATCATACCTGTGGCCATTGTGGGGTCCCTGCCCCTTCCCAACAGAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCCTTCCTTTTCTTCATCACATGCATGGTGTCGTGAATCATGTAAGCGGAAGAATAATTAAATGA 1299 0.4804 MAMSVIRTKGGLVKPAEETPLSTVLDLSAIDRLPVLRCNARTLHVFKHGGPEAPRVIREALSKALVPYYPLAGRLKESKPGCLQIECSGDGVWYVQASSDSTLHSVNFFDDVHSIPYDHLLPDAIPETQCIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGELARGLEKLSIEPVWNRDFFPSPQTPQETALPPTPPTMPDYKLEPANIDMPMDRINSVKREFQLATGLNCSAFEIVAAACWTTRTKAIDQFEANTELKLVFFANCRHLLDPPLPNGFYGNCFFPVTITASCESLRNATIVGVVKLIKEAKAKLPVEFDKYLKGEHLKNGEDPFAPPLTYTTLFVSEWGKLGFNHVDYLWGPPVHVVPIQGSSIIPVAIVGSLPLPNRGIRLMTWCVEEAHRLPFLHHMHGVVNHVSGRIIK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1862 432 PANTHER ACYL TRANSFERASE 4 1 421 - -
Gso19g1862 432 PANTHER ACYL TRANSFERASE 4 1 421 - -
Gso19g1862 432 Gene3D - 213 410 IPR023213 -
Gso19g1862 432 Gene3D - 2 204 IPR023213 -
Gso19g1862 432 Pfam Transferase family 5 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1862 Gso-Chr19 47307879 47310049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1862 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.960 1.85e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1862 - - gmx:100783128 896.345