Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso19g1853 | ATGGACGACTGTTGTGCCGTTTGTGCTGAGCCTTTGGAATGGGTTGCGTACGGACCCTGCTTGCACCGGGAGGTGTGTTCCACGTGCGTCGCTCGTCTCCGTTTCATCTGCGACGATCGCCTTTGCTGCATCTGCAAGACCGAATGCAACCTTGTTTTCGCCACCAAGGCTCTAGGTGATTATACAAGGATGATCAATGATTTTTCGACCCTTCCTTCAGAGGTGAGGGAGGGCAAGGTTGGATCATATTGGTACCATGAGGATACAAATACATTTTTTGATGATATGGACCATTACAGGATGATCAAGGCTATGTGCAGACTTTCGTGCAGTGTATGTGACAAGATTGAGGATCAACCACAGGATGCTGCATCAAGGCGGCGAGCGAAGTTTAGGAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCACAAGTTGCATATGTGCAATTTGTGTTTAGAAGGAAGGAAGGTTTTTATATGTGAGCAAAAACTATATACCAAAGCACAGTTGAATCAACACATAATCTCAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGCGGTTTCATGGGGCATCCCATGTGTGAATTCTGTAGAACCCCATTTTATGGAGACAATGAATTATACATGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGAGTACTATAAGAATTATGATGACCTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTACTAAGAAGTTTGTTGTTTTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACATGGAGGGCGGATGTCACGGTCCAAGCGTAATGCTGCTCTTCAGATACCAACTAGCTTCCGATACAGACATGGTAATGAACATGAGCAACGCCGTGGAAGAGGTCGTACGTTTCGTCGTGATACTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGCAGAGCGAACATTTCGTGATCAATCGACATCAAGTATTGGGCAAATTGCTGTTGATGATGGGAATGATGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGCTGCTGGAGGTTCTGAATCATCTGCAAGATACCTTCAAGCCTTGGGGCATAGCTCTAGAAATGGGCCTCTGGAAGATTCTTCCTTTCCACCTCTACCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAACTGGAAGGTTCATCTAGTAACACTATGGCTGCACGTCTGCGTCGGCATGGCAACAGAACTGTATCCGTTGTCAATTCTGGTAATGCTTGGCCAGCAGCAGGCCGTGGACTGGTACAAACATCAAGTAATCCTTCACAATCTAAACCGTCAACAAATAATGTTCTTGGACTGTCTCGTAACACTGGGCAGATGAAAACAGTAATTAACAGTGGACCTTCATCATCAACTTATGCAGGTTCTATTCAGGCTACACAAAGAACTACTCACGGACAATTACCTGCTGGTTCATCGAGGAACACACGCGACAATGTCAGAATTGTTCACTCTGCATCTGCTCCAAATCTCATGGAGAACAACTCTGTTGAAATTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAGTGAGTAAGTTACCTGCCAGCAGCCAGTCTAAATTAAACGTGGAAAATTTTCAATCTGCTAACAAGTCTTTGGTTGAAAAGATTCGTGGTGCTCTTGATTTTGATGAAGAAAGATACAGTATATTTAAAGACATATCTGCCCAATATCGCCAAGGCACAATAGATACAGGTACATATGTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTGCTTGAGTTGGCAAGACTATGCCCGGATACTCAGAAACAAAAAGAGCTTATTGAGGCTCACAACGCTAGTTTGCAAAGAGATGCTTTCCCAGAAATTAACTTAGTTCGAGGCACTGCTAGCACCCATCACAAAGACGGTAATTTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACTCCACAGAGAAATTAGCAGATAGCTTTTTAAGCACTGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGAGAAAGTGGAGGTGCTATCAAGGGGTGATTACCGCACTGACAGGGGCAAATTAAAAATCAAGCAGCAGATTGATTCAAATCCTGGTAGTCAACCTACAATGAAGCTTGGTGGGCAGACTGAAACATCAAATGGCAGTTTATCCGATCAAAGTAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAACTTCAAAGTTCCTGAGAGTGCGCCTTGGTGATGGTTCTGTTTCATCCCTTCTTGATCAATCAGATCCTGGAACAACAGACAGCTCAGAAGGTAACAATGATGACGTTGGAGGAGGGCCTCCTGTGCGAGGTGTTTGGCGAAAAGGGGGAGGTCATAAACTTTTTCCCTAG | 2502 | 0.4376 | MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRLCCICKTECNLVFATKALGDYTRMINDFSTLPSEVREGKVGSYWYHEDTNTFFDDMDHYRMIKAMCRLSCSVCDKIEDQPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCNLCLEGRKVFICEQKLYTKAQLNQHIISGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLTKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEHEQRRGRGRTFRRDTENQLSMAIEASLETANAERTFRDQSTSSIGQIAVDDGNDDIDSLIQPFESLAAGGSESSARYLQALGHSSRNGPLEDSSFPPLPITSSNGQQRSKHELEGSSSNTMAARLRRHGNRTVSVVNSGNAWPAAGRGLVQTSSNPSQSKPSTNNVLGLSRNTGQMKTVINSGPSSSTYAGSIQATQRTTHGQLPAGSSRNTRDNVRIVHSASAPNLMENNSVEISISDFPPVSAAQVSKLPASSQSKLNVENFQSANKSLVEKIRGALDFDEERYSIFKDISAQYRQGTIDTGTYVDYVQQFGLSHLVLELARLCPDTQKQKELIEAHNASLQRDAFPEINLVRGTASTHHKDGNLNKKGKGKSVDSRGSNSTEKLADSFLSTVHQLQANYKSSEEKVEVLSRGDYRTDRGKLKIKQQIDSNPGSQPTMKLGGQTETSNGSLSDQSKEDGGGGNKQRKKTSKFLRVRLGDGSVSSLLDQSDPGTTDSSEGNNDDVGGGPPVRGVWRKGGGHKLFP* | 834 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 736 | 767 | - | - | |
Gso19g1853 | 833 | SMART | c2h2final6 | 252 | 281 | IPR013087 | - | |
Gso19g1853 | 833 | SMART | c2h2final6 | 108 | 145 | IPR013087 | - | |
Gso19g1853 | 833 | SMART | c2h2final6 | 221 | 251 | IPR013087 | - | |
Gso19g1853 | 833 | SMART | c2h2final6 | 197 | 220 | IPR013087 | - | |
Gso19g1853 | 833 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Gso19g1853 | 833 | CDD | RING-HC_ZNF598 | 5 | 46 | IPR041888 | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 669 | 683 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 454 | 522 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 663 | 690 | - | - | |
Gso19g1853 | 833 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 831 | IPR044288 | GO:0061630|GO:0072344 | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 339 | 355 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 727 | 833 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 791 | 810 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 453 | 522 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 337 | 356 | - | - | |
Gso19g1853 | 833 | MobiDBLite | consensus disorder prediction | 390 | 425 | - | - | |
Gso19g1853 | 833 | PANTHER | EBR1 | 1 | 831 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso19g1853 | Gso-Chr19 | 47223995 | 47228608 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso19g1853 | 1 | 832 | C2H2 Transcription Factor Family | AT3G62240 | 51.804 | 0.0 | 827 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso19g1853 | K22381 | - | gmx:100780426 | 1657.11 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g1853 | 19 | 47223995 | 47228608 | Gso3g1889 | 3 | 44442197 | 44446639 | GST |