Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1826 ATGGACAATAATACTTGTGCCTCCTCCCAACTTGAGTCAGAAGAAGCATCTTTTGAGCACAAATCAGAAACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGACAGGAGAGAATGTTGGCAAGCTGAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCGATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCCGCCAAAAAGCAAGTAGAGAGATGCCGAACTGATGCTTCAATGCTCATAATCACATATACCTCTACACATAACCATCCATGCCCCACTGCCATCACCACAAATTCACCCCAACAACCAAAAGAATTATCCGAATCCGAAACCACCCAAGACCTCTCAGCTACCACAAAGGAGGAAGACCAAGAACATATAGAACTAGAAGAAGAGCAAAGGGATAATAATAAGCCCAGTGATGAAGTTACAAATGAAGAAAATTTTCATTACTTGCAATCTCCTATACGTTGCTCCGGCCAAGACATCATTATAGAACAAGAAGATCCTTTCAAACTAAACACGGAGAAAAGCCATGACAGAATGGATCTCCTCTTAGAGGAAGAGCCTCTTTGTTTTGCACAGCTTAAGAACTTGTCTGCTTCCAAAAACGAAGAGCTTGACTTTTTCGATGAGCTTGAGGAGTTACCCATGTCTTCATCTTTCTTGCACTTTACGAGAAACATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGA 795 0.4189 MDNNTCASSQLESEEASFEHKSETQTSKKRKMVEKTVVAVRTGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPCPTAITTNSPQQPKELSESETTQDLSATTKEEDQEHIELEEEQRDNNKPSDEVTNEENFHYLQSPIRCSGQDIIIEQEDPFKLNTEKSHDRMDLLLEEEPLCFAQLKNLSASKNEELDFFDELEELPMSSSFLHFTRNIFSDERIPVAPS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1826 264 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 13 249 - -
Gso19g1826 264 MobiDBLite consensus disorder prediction 110 138 - -
Gso19g1826 264 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g1826 264 MobiDBLite consensus disorder prediction 1 31 - -
Gso19g1826 264 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g1826 264 MobiDBLite consensus disorder prediction 14 31 - -
Gso19g1826 264 Gene3D WRKY domain 40 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso19g1826 264 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso19g1826 264 MobiDBLite consensus disorder prediction 110 167 - -
Gso19g1826 264 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g1826 264 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 249 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1826 Gso-Chr19 46984426 46986347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1826 2 117 WRKY Transcription Factor Family AT2G34830 53.448 6.34e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso19g1826 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1826 - - gmx:100127368 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1826 19 46984426 46986347 Gso3g1862 3 44198502 44200386 GST