Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1824 ATGGAAATTGACCAATTTTCTTCCACAGATTTAAATTTCAAAGGAACCCAGATGGGTTATGGTTCTACACAAGAGGATGTGTTCCAAGGTAAAGAGAGTCTCTCTGGAATGGAATTGCTGGGAGAGATTGATCCTCTCCCTGCTGAGAATGGAAAAGGAGTCAAATTGTTCAAATATCAAGATCAGAAACAGCTACAAGAACCCAAAGCTGATAACTTGATGTTGGAAGAGGTCAACTTTGACCCTGATGTCCAAATGCAACCAACACAACTATTTCAGGAAACTGAAGGACTAATGAAACATGGTGTGGCAAGTACAGAACCAGTTGAATACAATAAGCAGGTGGCACCAACACCATCATTAGCATCTTTAGAACTCTTGAGAAATTACGGAAGCCGGTTCAAGAGGCTAAGCGAGCAAAATATAAGCACCTTAAGCAATATTGAAACTTCCTTTGATCGCCAGAAGATGTCAACTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATATCCAATATTCTGCGCATTGGAATGATAGTTTTTACATCCCTATGCATCCATACGGATTGGATCTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACATAGAACTTGCTCAGTTTCTCCTAGCTGCAGCCGAGAGGGTAGGCTGCCAACAATTCGAACGTGCAAATGGGTTACTTCTCCATTGTGAATGGAGTTCAAATGCCAGTGCAAACCCTGTTCAAAGAGTTATCTTTCATTTCGCTCGAGCACTTCGAGAGAGAATATACAAAGAAACAGGAAGGATGACAGTTAAGGGATCAGGGAAAAATGAAGAAAGGGAGTTACTTCAGAAGATGGACACCAACATTGCCCTTAAATGCCATCTAAAAGTTCCTTTCAATCAAGTAATGCAATTCACTGGGATACAAGCTATAGTGGAGCATGTTGCATGTGAGACCAAAATCCATCTTATAGATCTTGAAATAAGAAGTGGTGTACAATACACAGCTTTGATGCAAGCACTGGCAGAGCGCCGGGATCGCATAGTGCAACTTTTGAAGATAACTGCCATTGGACTTAGTTCATTGAAAACCATGATAGAAGAGACTGGCAAAAGGTTAGCTAGTTTTGCTGAATCCTTGAACTTACCCTTTTCATATAAGACAGTTTTTGTGACCGACATTGCGGAAATAAGGGAAGATCATTTCGAAATTGGAGAGGATGAAGCTGTGGCAGTCTACTCTCCATATTTTCTAAGGAGCATGGTATCGAGGCCTGATTGTATGGAAAACTTGATGAGAGTTATAAGAAATATCAAACCAGTTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCGCCCTCCTTTGTGAACCGCTTCATTGAAGCATTGTTCTTCTACTCAGCATATTTTGATTGCCTTGAAACCTGCATAAAACATGAGATTGAGTGCAGAATGACAATAGAAGCAGTATTATCTGAAGGGATAAGAGACATTGTTGCTATGGAAGGAAGGGAAAGGACAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTTGAAACCGGGTTTAGTGAGTCATCTCTGTACCATGCTCACTTGGTTGCCAAAGGGTTTTCTTTTGGGAAATTCTGCACTATAGAAAAAAATGGAAAGTGTCTTATAGTGGGATGGAAAGGGACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1731 0.405 MEIDQFSSTDLNFKGTQMGYGSTQEDVFQGKESLSGMELLGEIDPLPAENGKGVKLFKYQDQKQLQEPKADNLMLEEVNFDPDVQMQPTQLFQETEGLMKHGVASTEPVEYNKQVAPTPSLASLELLRNYGSRFKRLSEQNISTLSNIETSFDRQKMSTEEIIRVAGARYIQYSAHWNDSFYIPMHPYGLDLGGLSEEENRDIELAQFLLAAAERVGCQQFERANGLLLHCEWSSNASANPVQRVIFHFARALRERIYKETGRMTVKGSGKNEERELLQKMDTNIALKCHLKVPFNQVMQFTGIQAIVEHVACETKIHLIDLEIRSGVQYTALMQALAERRDRIVQLLKITAIGLSSLKTMIEETGKRLASFAESLNLPFSYKTVFVTDIAEIREDHFEIGEDEAVAVYSPYFLRSMVSRPDCMENLMRVIRNIKPVIMIVLEVEANHNSPSFVNRFIEALFFYSAYFDCLETCIKHEIECRMTIEAVLSEGIRDIVAMEGRERTVRNVKIDVWRRFFARYRMVETGFSESSLYHAHLVAKGFSFGKFCTIEKNGKCLIVGWKGTPMHSISAWRFL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1824 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 59 574 - -
Gso19g1824 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 574 IPR005202 -
Gso19g1824 576 Pfam GRAS domain family 206 574 IPR005202 -
Gso19g1824 576 ProSiteProfiles GRAS family profile. 196 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1824 Gso-Chr19 46972515 46974954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1824 203 575 GRAS Transcription Factor Family AT1G66350 29.679 1.10e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso19g1824 GRAS 4.9e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1824 - - gmx:100791952 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1824 19 46972515 46974954 Gso3g1860 3 44189288 44193606 GST