Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1796 ATGTTCGGCACCGTCGAGCACGACGAAATTCGACGCGCTTATCGTAAGATGGATCTGTGGTATCCTGATAGGTGGATCAAGGACCCAAAGCTTGCACTAGAAGCTAAAAAGAGATTTCAGCGCGTTCAAGAGGCTTATTCAGTTTTGTCCAATAAAGGGAAGAGAAGGATATATGATGCTGGCTTGTTTGGTCTGATTGGAGAGGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGGCCTCGACGATGCAGAAAGTGAGACCCAAGGATGAGAAAGGCATGTTGGAGGATCTTCAAGGATTGTTAATGGTTATGATGGCAGATAATGAAGGAATGGGAAAGTCTGGGTTAAGCTGGAATTCATCTCCATGTCCTACAAAAAGGACACGTATCTTGTGA 405 0.442 MFGTVEHDEIRRAYRKMDLWYPDRWIKDPKLALEAKKRFQRVQEAYSVLSNKGKRRIYDAGLFGLIGEDDDEGFVDFMQEMASTMQKVRPKDEKGMLEDLQGLLMVMMADNEGMGKSGLSWNSSPCPTKRTRIL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1796 134 ProSiteProfiles dnaJ domain profile. 1 62 IPR001623 -
Gso19g1796 134 CDD DnaJ 8 51 IPR001623 -
Gso19g1796 134 PANTHER PUTATIVE, EXPRESSED-RELATED 7 133 - -
Gso19g1796 134 Gene3D DnaJ domain 3 64 IPR036869 -
Gso19g1796 134 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 7 133 - -
Gso19g1796 134 SUPERFAMILY Chaperone J-domain 6 63 IPR036869 -
Gso19g1796 134 Pfam DnaJ domain 6 59 IPR001623 -
Gso19g1796 134 ProSitePatterns Nt-dnaJ domain signature. 39 58 IPR018253 -
Gso19g1796 134 SMART dnaj_3 5 54 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1796 Gso-Chr19 46698669 46700272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1796 - - gmx:102668305 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1796 19 46698669 46700272 Gso3g1829 3 43929153 43930797 GST