Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1721 ATGCCGGCTGGTCATGGTTTGAGATCCCGCACCAGAGATTCCTTCTCTCGTCCTTTCAGGAAGAAGGGAACCATCGCCCTCACCACATACCTGAGAACCTACCACGTCGGCGATTATGTTGACGTCAAGGTTAACGGTGCCGTTCACAAGGGAATGCCCCACAAGTTCTACCATGGCCGCACCGGACGCGTCTGGAATGTCACCAAACGTGCTGTTGGCGTCGAAGTCAACAAGCAGGTTGGCAACAGAATTATAAGGAAGAGGATTCATGTGCGGGTAGAGCATGTTATGCCTTCAAGGTGCACTGAGGAGTTCCGCCTCAGGAAGATTAAGAATGATCAGCTAAAGGCCGAAGCCAAGGTCAAGGGTGAGAAGATCAGCACCAAGAGACAGCCTCAGGGTCCCAAACCCGGTTTCATGGTGGAGGGTGCGACCCTTGAGACAGTTACCCCCATCCCATATGACGTTGTCAATGACCTCAAGGGAGGTTATTAG 495 0.5253 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHVGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKVKGEKISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1721 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Gso19g1721 164 PANTHER 60S RIBOSOMAL PROTEIN L21-1 1 164 - -
Gso19g1721 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 164 IPR001147 GO:0003735|GO:0005840|GO:0006412
Gso19g1721 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Gso19g1721 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Gso19g1721 164 Gene3D - 99 156 - -
Gso19g1721 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso19g1721 Gso-Chr19 46095718 46096851 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1721 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 85.366 6.95e-105 295
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1721 K02889 - gmx:100500046 339.347
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1721 19 46095718 46096851 Gso3g1751 3 43339400 43340496 GST