Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1702 ATGGGTTCCCTCCCTCACGTAGTAGAGGATTGCATGGGCTTCCTCCAACTCTATAGCGACGGTTCCATTTTCCGTTCCAACGGCATAGAATTCAAAGTTTCACCCATTCAAGACAACTCCATAACCTATAAGGATTATCTCTTTGACAAAAGATTCAACCTTTCTCTTCGCTTCTACAAGCCCCAACAACAACACATAGCACTCAGCAATAAGAAGGTCCCTATTGTGATTTTCCTTCACGGTGGAGGCTTTTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCATGCGCCTCGCGTCGGGGCTCCAAGCGGCGGTGGTTTCGCCGGACTACCGTCTCGCGCCGGAGCACCGTCTTCCTGCTGCGGTGGACGACGCCGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGCCTGAGCTTGAGGGAGGACGCGTGGTTGAGTGGGGGCGTTGACTTTGACCGCGTCTTCGTCGTGGGTGACTCGTCTGGCGGGAACATTGCGCACCACCTGGCAGTTCGGTTGGGGTCCGGTTCGAGAGAGATGGACCCGGTTCGGGTACGAGGTTACGTCTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGGACCAAGTCCGAGGAAGGTCCACCAGAGCACATGTTGAGCCTTGAGTTACTAGACAGATTTTGGAGGCTTTCGATGCCTGTTGGAAAGAGCCGAGACCACCCATTGGCGAATCCGTTCGGACCTGGAAGCCCAAATCTTGAACAAGAGAAGCTTGATCCTATTTTGGTGATAGTAGGTGGCAATGAATTGCTCAAGGATAGGGCAAAAAATTATGCTACAAGGTTAAAAGAATTAGACAAGGACATTAAATACGTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACGCATGATTCATTCTCATCAGAAGTTGCAGAAGAGGTCATCCAAATCCTTAAACGATTCATGCTTGCAAACTTCTAG 975 0.5169 MGSLPHVVEDCMGFLQLYSDGSIFRSNGIEFKVSPIQDNSITYKDYLFDKRFNLSLRFYKPQQQHIALSNKKVPIVIFLHGGGFCFGSRTWPHIHNCCMRLASGLQAAVVSPDYRLAPEHRLPAAVDDAVEAVRWLQRQGLSLREDAWLSGGVDFDRVFVVGDSSGGNIAHHLAVRLGSGSREMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLSLELLDRFWRLSMPVGKSRDHPLANPFGPGSPNLEQEKLDPILVIVGGNELLKDRAKNYATRLKELDKDIKYVEFEGCEHGFFTHDSFSSEVAEEVIQILKRFMLANF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1702 324 PANTHER CARBOXYLESTERASE 15-RELATED 4 321 - -
Gso19g1702 324 Coils Coil 265 285 - -
Gso19g1702 324 Pfam alpha/beta hydrolase fold 76 299 IPR013094 GO:0016787
Gso19g1702 324 Gene3D alpha/beta hydrolase 19 321 IPR029058 -
Gso19g1702 324 PANTHER ARYLACETAMIDE DEACETYLASE 4 321 - -
Gso19g1702 324 SUPERFAMILY alpha/beta-Hydrolases 4 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1702 Gso-Chr19 45949019 45952075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1702 7 305 Carbohydrate Esterase AT5G16080 34.314 2.22e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1702 - - gmx:100783849 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1702 19 45949019 45952075 Gso3g1733 3 43189229 43192237 GST
Gso19g1702 19 45949019 45952075 Gso2g1416 2 27097148 27102319 PCT
Gso19g1702 19 45949019 45952075 Gso10g0796 10 11416683 11422804 PCT
Gso2g1416 2 27097148 27102319 Gso19g1702 19 45949019 45952075 PCT
Gso10g0796 10 11416683 11422804 Gso19g1702 19 45949019 45952075 PCT