Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1677 ATGTTAGGAGATTATGAAGTTGCCTTGTCAAATTATCGCCTAATTTCCACCGAATACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGAAGAGTTTCTGCAAGGATCTTGAGCTTGAACGTTCTCAACTAGCATTCTCTCAGCCAACCTCAGCTGGAAAGGCATTGGCAACAAGTTACACTGGCACTGGATCATTCTTGGCGTATTAA 1044 0.4684 MLGDYEVALSNYRLISTEYKIDKAWKRYAGVQMQSKISAFFKSTTSDSSSVSADNDDDLSIWEKQQHHIINTYTRRPPNPNAVIPSVVKNKKRSYAQFHLDFGQSDFLLRACSTCGINFTPGDPDDEKSHNHFHKSYTQGIQFRGWTKENVIPLPTLEAGRIILVSEIDLTSHRRIVEQVVSMMEIELGCGWILHDLFKVYLFVSLHRVVGCLVAEPIEKAFKVVSGSPDSVKKREVRTRSTTLRFGNVIFQREVEKKVASLSDSERMEGAIFCDSKPTTAACGIRAIWVAPSNRRKGIASKLLDAVRKSFCKDLELERSQLAFSQPTSAGKALATSYTGTGSFLAY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1677 347 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 1 50 IPR024420 -
Gso19g1677 347 Pfam zinc-finger of acetyl-transferase ESCO 97 135 IPR028005 -
Gso19g1677 347 PANTHER N-ACETYLTRANSFERASE ECO 33 347 - -
Gso19g1677 347 PANTHER N-ACETYLTRANSFERASE ECO 33 347 IPR033257 GO:0000070|GO:0007062|GO:0016407|GO:0045132
Gso19g1677 347 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 265 319 IPR016181 -
Gso19g1677 347 CDD NAT_SF 271 322 - -
Gso19g1677 347 Pfam ESCO1/2 acetyl-transferase 280 347 IPR028009 -
Gso19g1677 347 Gene3D - 207 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1677 Gso-Chr19 45696197 45698778 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso19g1677 Acetyltransf_13 2e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1677 K11268 - gmx:100811441 684.485