Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1666 ATGGCCGATAAGCAACCCCACTTGAACGGTGCTTATTACGGTCCCGCCATTCCCCCGGCGGAGCAACCACGCTACCGCCCTCACCGCGGCAGAAGCTGCTGTTGCTGTCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTTATTGTCCTCGTTGGCCTTGCAATCCTCATTTTCTGGTTGGTGGTTCAACCCCGCTACTTCAAGTTCCATGTCACGAAAGCCGACCTAACACAATTTGATTACTATAGCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAGGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCCAATTACGATGTGATCACTCACATGAACTCCTTCCGGCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCTGTTTTCACGGGGCAGCAAGTGCTGATGCTCAACAATGAACAAGTCTCAGAGTTGAACCAAGACAAGAATGCTGGGGTTTATGACATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTTGGGGACGTCATATCCAATGACTACAAGCCCAAGGTCAAATGTCACCTCAAGGTCCCTTTTAGTAAAAATGGCACCTTTACTCTGTTTCCGACCACCAAGTGTGATGTCGATTTCTAA 684 0.4883 MADKQPHLNGAYYGPAIPPAEQPRYRPHRGRSCCCCLFGILWKILVALIVLVGLAILIFWLVVQPRYFKFHVTKADLTQFDYYSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFANYDVITHMNSFRQYKKSSSPMSAVFTGQQVLMLNNEQVSELNQDKNAGVYDIYVKLYFRIRFRLGDVISNDYKPKVKCHLKVPFSKNGTFTLFPTTKCDVDF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1666 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Gso19g1666 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Gso19g1666 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1666 Gso-Chr19 45568706 45569647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1666 62 210 SNARE and Associated Proteins AT1G32270 34.228 1.48e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1666 - - gmx:100807701 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1666 19 45568706 45569647 Gso3g1697 3 42816678 42817677 GST
Gso19g1666 19 45568706 45569647 Gso10g0693 10 9277592 9278521 PCT
Gso10g0693 10 9277592 9278521 Gso19g1666 19 45568706 45569647 PCT