Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1665 ATGGCCGATAAGCAACCCCACCTGAACGGTGCTTATTACGGTCCCGCCATTCCCCCGGCGGAGCAACCACGCTACCGCCCTCACCGCGAAAGAAGCTGCTGCTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGCCTCGCAGTACTCATATTCTGGCTGGTGGTTCAACCCCGCTACTTCAAGTTCTACGTCACGGAAGCCGACCTAACACAATTTGATTACTATAGCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAGGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCCAATTACAGTGTGATAACGCCCATGAACTCCTTCCGGCAGTACAAGAAGAGCAGCAGCACCATGAGCGCTGTTTTATCGGGGCAGCAAGTGTTGCCGCTCGACAACGACCTAGTCTCAGAGTTGAACCAAGACAAGATTGGTGGGGTGTACGAGATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTCGGGGATGTCAAAACCCGTCGCTTCAAGCCCAAGGTCAAATGTGATGCGAAGGTTCCCTTGAGGACCATGGGCAACGTAACTCTGTTTCAGACCACCAAGTGTGATGTCGATTACTAG 684 0.5146 MADKQPHLNGAYYGPAIPPAEQPRYRPHRERSCCCCLFGILWKILVALIVLVGLAVLIFWLVVQPRYFKFYVTEADLTQFDYYSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFANYSVITPMNSFRQYKKSSSTMSAVLSGQQVLPLDNDLVSELNQDKIGGVYEIYVKLYFRIRFRLGDVKTRRFKPKVKCDAKVPLRTMGNVTLFQTTKCDVDY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1665 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
Gso19g1665 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Gso19g1665 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1665 Gso-Chr19 45564760 45565663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1665 62 209 SNARE and Associated Proteins AT1G32270 34.459 2.84e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1665 - - gmx:100807174 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1665 19 45564760 45565663 Gso3g1696 3 42813690 42814726 GST
Gso19g1665 19 45564760 45565663 Gso10g0692 10 9250829 9251806 PCT
Gso10g0692 10 9250829 9251806 Gso19g1665 19 45564760 45565663 PCT