Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1664 ATGTCCCAGTTGAACGGAGCCTACTATGGCCCCTCCATCCCGCCGCCGAAAACCTCCTACCACCGCCCAGGGCGCGGCGGAGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCATCTTCAAGCTCATCTTAACCGTGATAATCATCGTTGGCATCGCCGGGTTCGTGTTCTGGCTCATAGTCCGTCCGAACGTGGTGAAATTCCACGTGACCGACGCCACCCTGACGCAGTTCAACTACACCGCCAACAACACTCTCCACTACGACCTCGCCCTAAACATCACGGTCCGAAACCCCAACAAGAGGCTCGGAATCTACTACGACCGCATCGAGGCGCGTGCAATGTTCCACGACGCAAGGTTCGATTCACAGTTCCCGGAGCCGTTCTACCAGGGCCACAAGAGCACGAAGGTGCTGAACCCAGTCTTCAAGGGTCAGCAAGTGGTGCCACTCAACGCTGAGCAAAGCGCGGAACTGAAGAAGGAGAACGCCACTGGGGTGTACGAGATCGACGTGAAGATGTACCTTAGGGTGAGGTTCAAGCTGGGGGTGTTGAAGACCAAGACGCTCAAGCCCAAAGTATCATGCGACTTGCGTGTTCCTTTCAAAGGAAGCGCCGCCTTTGAGACCACCAAGTGCCACTGGGATCGCTGA 651 0.5714 MSQLNGAYYGPSIPPPKTSYHRPGRGGGCCCGCLFSLIFKLILTVIIIVGIAGFVFWLIVRPNVVKFHVTDATLTQFNYTANNTLHYDLALNITVRNPNKRLGIYYDRIEARAMFHDARFDSQFPEPFYQGHKSTKVLNPVFKGQQVVPLNAEQSAELKKENATGVYEIDVKMYLRVRFKLGVLKTKTLKPKVSCDLRVPFKGSAAFETTKCHWDR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1664 216 Pfam Late embryogenesis abundant protein 92 195 IPR004864 -
Gso19g1664 216 PANTHER OS05G0367900 PROTEIN 20 214 IPR044839 GO:0098542
Gso19g1664 216 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 20 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1664 Gso-Chr19 45561445 45562367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1664 59 201 SNARE and Associated Proteins AT1G32270 40.972 2.32e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1664 - - gmx:100806641 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1664 19 45561445 45562367 Gso3g1695 3 42808087 42809160 GST
Gso19g1664 19 45561445 45562367 Gso2g1678 2 39836056 39837100 PCT
Gso19g1664 19 45561445 45562367 Gso10g0687 10 9088381 9089426 PCT
Gso2g1678 2 39836056 39837100 Gso19g1664 19 45561445 45562367 PCT
Gso10g0687 10 9088381 9089426 Gso19g1664 19 45561445 45562367 PCT