Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1656 ATGTTAGCAAGTACTCACGGAAACACAGACACCACAGCAATGTCTGGCTCCAGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAAGACCAAACCTGTGTCGCATATTCCACCCGAAGCCAAAACCCAAGAATCTTAACAACACTTACCGAAAGCACAAACATTCTTCTTCTTCTTCTTCCTTTTTTTCAGGCCAATGGGGTGGTGAGGACAAGTGTGACAGCACCAGCACCACCCCCACCCCCACCCCCACCAACACCACATTCTCACCCTACGTTGATTCCTCGCACTTTTCTGACTCAGATTCGTACGTGAAGGCCGTGGGGGGTTTAGGCAGAGCTGGGAAAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTTGATTTCAGACATTCCATGCTGCAAATGATATTGGAGAATGAGATATACTCCAAGCAAGATCTCAGAGAGCTTCTCAACTGCTTTCTTCAGCTGAATTCACCGCACCACCATGGTGTCATAGTCAGAGCTTTCACTGAGATCTGGAATGCTGTTTTCTCTGTGAGGTCCAGTTCACACATCAACCGTAAGCCACGTGAGTTCTAA 615 0.4846 MLASTHGNTDTTAMSGSRKKLLLNTVSVKLGCGTCRRPNLCRIFHPKPKPKNLNNTYRKHKHSSSSSSFFSGQWGGEDKCDSTSTTPTPTPTNTTFSPYVDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNAVFSVRSSSHINRKPREF* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1656 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 14 193 IPR038933 GO:0045892
Gso19g1656 204 Pfam Transcriptional repressor, ovate 132 188 IPR006458 -
Gso19g1656 204 ProSiteProfiles OVATE domain profile. 128 187 IPR006458 -
Gso19g1656 204 PANTHER TRANSCRIPTION REPRESSOR OFP6 14 193 - -
Gso19g1656 204 MobiDBLite consensus disorder prediction 46 97 - -
Gso19g1656 204 MobiDBLite consensus disorder prediction 59 97 - -
Gso19g1656 204 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 126 188 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1656 Gso-Chr19 45502216 45503244 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso19g1656 Ovate 3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1656 - - gmx:106797222 393.66