Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1637 ATGGAAAATATGCCACCAGGTTATCGTTTCTACCCCACAGAAGAGGAGCTGATTTCGTTCTATCTTCACAACAAGCTTGAAGGAGAAAGGGAAGACATGAATCGAGTTATTCCAGTCGTTGATATATACGACTACAACCCATCTGAACTCCCACAAATTTCAGGAGAGGCAAGTATGAGAGACACGGAGCAATGGTTTTTTTTCATTCCGAGGCAAGAGAGTGAAGCGAGAGGAGGGAGACCAAAGCGTCTCACAACTACAGGGTACTGGAAGGCAACAGGGTCTCCTAATCATGTTTATTCTTCGGATAATCGCATCATCGGAATTAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAACGGAACCAAAACCGATTGGAAGATGAATGAGTACACTGCCATCAAAACATCATCCTCTAGTCCCACGCTAAGGAAGGAATTCAATTTATGCAGAGTGTACAAAAAATCAAAGTGTTTGACAGCATTTGATAGACGACCACCGCCAAGGAGGGACACAGAAAGCTATTCGGGTGCTCAAAATGTAGAAGAGCAACAAAAGGGTTCAACATCATATGATGATTATCATCATAAAATGGTGGAGAGAAGTGCAACGTGTTCACCAGCAGAGAGCTCTTCCTCCGGAGACCATGACCAACCCCCTCTTCACGGTGAGGAAGCTACTCAAATGGATGTTGACAACAACGATGACCCTTTTTTGGATTGGGAGAAAGTGGATATGTTCTTGGGATCAGAACCATGA 765 0.4379 MENMPPGYRFYPTEEELISFYLHNKLEGEREDMNRVIPVVDIYDYNPSELPQISGEASMRDTEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNRIIGIKRTMVFYSGRAPNGTKTDWKMNEYTAIKTSSSSPTLRKEFNLCRVYKKSKCLTAFDRRPPPRRDTESYSGAQNVEEQQKGSTSYDDYHHKMVERSATCSPAESSSSGDHDQPPLHGEEATQMDVDNNDDPFLDWEKVDMFLGSEP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1637 254 MobiDBLite consensus disorder prediction 175 189 - -
Gso19g1637 254 SUPERFAMILY NAC domain 2 157 IPR036093 GO:0003677|GO:0006355
Gso19g1637 254 MobiDBLite consensus disorder prediction 190 204 - -
Gso19g1637 254 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Gso19g1637 254 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Gso19g1637 254 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 248 - -
Gso19g1637 254 MobiDBLite consensus disorder prediction 163 254 - -
Gso19g1637 254 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 248 - -
Gso19g1637 254 ProSiteProfiles NAC domain profile. 4 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1637 Gso-Chr19 45280198 45282508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1637 2 247 NAC Transcription Factor Family AT3G44350 45.418 1.75e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso19g1637 NAM 1.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1637 - - gmx:100777948 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1637 19 45280198 45282508 Gso3g1663 3 42533213 42535453 GST