Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1627 ATGGATATATCAAATCCAGCAGCCTTAGTCAATGCAGAACTGTTGCACTTCTATGTTGGAAGCAGGGTAAGGGTTGTGATGCAGGTTGTGCGATCTGATGGTGTTGTGATTGGAAAATCAACAGATGAGAAACAACTAGTTGTAAAAGGATCACCCCCACCTGCTCCTCATACAACTTATGTCGAAGTTTATGGTGCTGAGATATGGACCAATTTTGGTGATGCCATTGATATGGATAGCTACAATAAGCTCTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTGTGA 294 0.415 MDISNPAALVNAELLHFYVGSRVRVVMQVVRSDGVVIGKSTDEKQLVVKGSPPPAPHTTYVEVYGAEIWTNFGDAIDMDSYNKLCQLANGEFKHLFL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1627 97 Pfam Replication factor A protein 3 4 93 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso19g1627 97 Gene3D - 3 97 IPR012340 -
Gso19g1627 97 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A 1 97 - -
Gso19g1627 97 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 97 - -
Gso19g1627 97 SUPERFAMILY Nucleic acid-binding proteins 5 96 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1627 Gso-Chr19 45205637 45206367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1627 1 97 Core DNA Replication Machinery Family AT4G18590 60.748 1.69e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1627 K10740 - gmx:121174132 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1627 19 45205637 45206367 Gso3g1652 3 42459859 42462283 GST
Gso19g1627 19 45205637 45206367 Gso2g1225 2 15261321 15270917 PCT