Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1607 ATGGCCGAAGAACACCGATGCCAAGCTCCCGAAGGTCACAGACTCTGCTCCAACAACTGCGGTTTCTTTGGTAGCCCCGCCACCATGAATCTCTGTTCCAAATGCTACAGAGACATCCGTTTGAAGGAAGAAGAACAAGCCAAAACCAAATCCACAATCGAAACCGCTCTTTCAGGATCTTCCTCCGCCACCGTCACCGCAACCGCCGTCGTTGCCTCCTCCGTGGAATCCCCTTCGGCGCCGGTTGAATCCCTCCCTCAACCACCGGTGCTGATTTCGCCGGATATAGCCGCACCGGTTCAGGCGAACCGGTGCGGCGCGTGTAGGAAGCGCGTGGGGTTGACAGGGTTCAAGTGCAGGTGCGGAACAACGTTTTGTGGGAGCCACAGGTACCCCGAGAAACACGCGTGTGGCTTCGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCACGGGCGAATCCCGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 495 0.5697 MAEEHRCQAPEGHRLCSNNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSGSSSATVTATAVVASSVESPSAPVESLPQPPVLISPDIAAPVQANRCGACRKRVGLTGFKCRCGTTFCGSHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1607 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Gso19g1607 164 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Gso19g1607 164 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 164 - -
Gso19g1607 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 164 - -
Gso19g1607 164 Gene3D - 1 64 - -
Gso19g1607 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Gso19g1607 164 SUPERFAMILY AN1-like Zinc finger 100 159 IPR035896 -
Gso19g1607 164 Gene3D - 77 160 IPR035896 -
Gso19g1607 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Gso19g1607 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Gso19g1607 164 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Gso19g1607 164 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1607 Gso-Chr19 45038689 45040047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1607 1 164 C2H2 Transcription Factor Family AT3G52800 52.353 1.36e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1607 - - gmx:100789686 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1607 19 45038689 45040047 Gso3g1630 3 42293035 42294383 GST
Gso19g1607 19 45038689 45040047 Gso10g0610 10 7282846 7284429 PCT