Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1604 ATGATGAACTCGCACAAACAACTCTTCCCCCTCTTCTCACTTTTCTTAGTTCTCTACCTCTTAGGACAAAGGGTAGTGCTGCAAGCTGAAGCAAGTCCTCAACATGGTCCAACAAAATTGTTCGTTTTCGGAGACTCGTATGCTGACACAGGAAACATTCAGAGAACTGTCTCAAATTCATGGAAGGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGACGGAAGAGTCCTAACCGATTACATCGCTAAGTATTTGAAAGTGAAATCACCAATCCCCTACAGATTGAGGAAACTGATGCCACAACATCTGAAATATGGGATGAACTTTGCGTTTGGGGGCACTGGTGTCTTTAACACTTTCGTTCCACTCCCAAACATGACAACACAGATTGATTTCTTGGAGCAACTCATCAAAGACAAAGTGTACACTACCTTAGATCTCACCAACTCGGTGGCCCTTGTCTCTGTCGCTGGAAATGACTACGGTCGTTACATGCTAACAAATGGCTCCCAGGGTTTACCATCTTTCGTGGCCTCAGTTGTTAATCAAACAAGAAGCAATCTTATTCGCATCAAAGGGTTGGGGGTGAAGAAAATAGTGGTGGGTGCTCTACAACCCCTTGGATGCCTTCCCCAGGAGACAGCCACAAGCTCGTTCCAACGTTGCAACGCCACCTCCAACGCCCTCGTGCTTCTCCACAACAGCCTCCTGAACCAAGCAGTGACCAAGTTGAACCAATTAGAGACCACCAAGGACCGTTATTCCACCTTCGTAATCCTCAACCTTTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACCCACAACATTCGGAACAAGTTGACGCCGTGCTGCGTTGGCGTAAGCAGTGGGTACTCGTGTGGGAGCGTGGACAAGAACAATGTGAAGAAATATAGGGTTTGTGATGACCCCAAATCTGCTTTCTTTTGGGATCTTGTGCACCCTACGCAGGCTGGATGGCATGCAGTGTATAACAAGTTGCGAACCATGAACGCTCTTCAACACATTCTTTACTAG 1059 0.4778 MMNSHKQLFPLFSLFLVLYLLGQRVVLQAEASPQHGPTKLFVFGDSYADTGNIQRTVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRLRKLMPQHLKYGMNFAFGGTGVFNTFVPLPNMTTQIDFLEQLIKDKVYTTLDLTNSVALVSVAGNDYGRYMLTNGSQGLPSFVASVVNQTRSNLIRIKGLGVKKIVVGALQPLGCLPQETATSSFQRCNATSNALVLLHNSLLNQAVTKLNQLETTKDRYSTFVILNLFDSFMSVLNHPSTHNIRNKLTPCCVGVSSGYSCGSVDKNNVKKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQHILY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1604 352 CDD SGNH_plant_lipase_like 40 341 IPR035669 -
Gso19g1604 352 Pfam GDSL-like Lipase/Acylhydrolase 40 340 IPR001087 GO:0016788
Gso19g1604 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 352 - -
Gso19g1604 352 Gene3D SGNH hydrolase 28 349 IPR036514 -
Gso19g1604 352 SUPERFAMILY SGNH hydrolase 37 341 - -
Gso19g1604 352 PANTHER OSJNBB0059K02.9 PROTEIN 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1604 Gso-Chr19 45015032 45018632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1604 26 337 Pollen Coat Proteome AT1G75930 27.596 9.27e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1604 - - gmx:100788092 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1604 19 45015032 45018632 Gso3g1627 3 42267987 42272015 GST