Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1595 ATGGCTCAGAGGTACTTGCACCAGCTACTTGAAGAGGATCAAGAGCCGTTCCTTCTAAACAAGTACATTTCCGATAGGCGAAGCCAAATGAAAAGGCCTTCCCCGATGACGAGTTTGCAAGTGAAGAAACGCAAATCAACCAATCCAAACGCAAACTTCCCGAGAAATCTCTGCAAAAGCGCTTGTCTTTTCTCCCTCACAGACACTCCAGACCTCAGAAAATCACCACTCTTCGAATTCGCTTCCCCAGTCAAAAGCCCTTACAAATCACCAAACCCTATTTTTCTTCACATCCCTTCTAGAACCGCTGCTCTGCTTCTAGAAGCCGCTCTCAGGATCCAGAAACACACTTCAAAGCCCAAAACAAAAGCCCAATCCTTCGGCCTCTTTGGGTCACTATACAAGAGACTCACTCAGCGGAGCCATAAAAGGCGAGAGATAGAGTGTGGTGGTGGTGGCGTTAAGGTCTCGGTGAAGGATGTTTTGAAGTGGGATTCCTCTGTGGGGCGAAGAAAAGCTTCTAAAGCCAACGGGAAATGCAAGGAAACAGGGAATGTGAATACGAATGCGAGTGAAGTGGGGTTTGCGTGTTCTTACAATATTGGTAGGCCTAGTAGTAGTGCTGTTTGGTCAGAGAGCAATGAAGATAAATCACTAGACATTGAAACCTCAAGTAGTGGCTACTCTGAAAAGATTCACTTCGTAACCAATATACACAAACACTACTCCACGTGCTTCTGCGAAAGCCCGTTCCGTTTTGTTCTTCAAACCAGCACCCCTTCCTCCGGCCACCACACGCCGGAGCTTCCCTCGCCGAGTCGCCACCCAACTGAGGAGAAAGAAAGTAATGAAGGTGAGAGTCTGAAGAAATTCGAATCAGGGGAAGAAGAGGAGGAAGATAAGGAACAGTGCAGTCCAGTGAGTGTGTTAGACCCACCATTCGAGGACGACGACGAAGGGCATGGAAACGGTGATGAAGAAGAAGAGGAAGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTATAAGCTTCGTAGATTTGAGAAACTGGCGGAGTTGGATCCAGTGGAACTTGAGAAAAGAATGCAGGATCAAGAAGAGGACGAGGATGAAACATTTATGGAAGAGGAAGATGGCCATGATGAGAAAAACCAAGCATCATGCAAAGAAAATGACTTTAGAAAACTAATTTTCCAAGCTCTGTGCCAGTCAAGGGTCCATGACAGACAGCAAATCCCAGAGGACTTTAAGAAGCTGGTTTCTGATCTCATTTTGGAAGAAGAGAGAGCACTTGATTCCTTAGAAGATAAGGACATGGTGATAAGCAGGATATGCAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCTAATACAATTGACATGATGATAGAAGATGACTTCTCTAGAGAGGATAGTGAGTGGAAGAGAAATATAGAGCATATAAGAAATATGGCTGGGGAGCTTGAGCTTGCTATCTTTGGCTTTCTGGTGGAGGAATTTTCAGAGGAACTAGTATGTTAA 1557 0.4554 MAQRYLHQLLEEDQEPFLLNKYISDRRSQMKRPSPMTSLQVKKRKSTNPNANFPRNLCKSACLFSLTDTPDLRKSPLFEFASPVKSPYKSPNPIFLHIPSRTAALLLEAALRIQKHTSKPKTKAQSFGLFGSLYKRLTQRSHKRREIECGGGGVKVSVKDVLKWDSSVGRRKASKANGKCKETGNVNTNASEVGFACSYNIGRPSSSAVWSESNEDKSLDIETSSSGYSEKIHFVTNIHKHYSTCFCESPFRFVLQTSTPSSGHHTPELPSPSRHPTEEKESNEGESLKKFESGEEEEEDKEQCSPVSVLDPPFEDDDEGHGNGDEEEEEEEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELEKRMQDQEEDEDETFMEEEDGHDEKNQASCKENDFRKLIFQALCQSRVHDRQQIPEDFKKLVSDLILEEERALDSLEDKDMVISRICKRLELWKEVESNTIDMMIEDDFSREDSEWKRNIEHIRNMAGELELAIFGFLVEEFSEELVC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1595 518 MobiDBLite consensus disorder prediction 258 335 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 30 52 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 206 225 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 375 389 - -
Gso19g1595 518 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 518 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 28 52 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 318 335 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 371 398 - -
Gso19g1595 518 MobiDBLite consensus disorder prediction 271 296 - -
Gso19g1595 518 PANTHER OS04G0572500 PROTEIN 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1595 Gso-Chr19 44887796 44891464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1595 2 315 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.620 4.21e-60 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1595 - - gmx:100814311 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1595 19 44887796 44891464 Gso3g1615 3 42091148 42094823 GST
Gso19g1595 19 44887796 44891464 Gso10g0583 10 6743426 6747605 PCT
Gso10g0583 10 6743426 6747605 Gso19g1595 19 44887796 44891464 PCT