Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1576 ATGACCTATAATAACAACAGCTTCAACACTTTTCCTCAATCACACACTCTCTCCAATCATATTCTCATTGCATTTGCTAATCCCAAATCTGAAATTTCTTTTAAATTAAAAACACCACCATCGTTCCCTCCCTTCCCACACCATAACATGAAACAGGTTTGTCTTTGTCTCATAATCCTGACACTGGCCTTGTGCTTGTGCATCCTCTGTGTTTCTGCAGAGGCTGCAGGGCAGAACGATACACTCGCACTTACCGAATTCCGTCTCCAAACCGACACCCACGGCAACCTCCTCACCAACTGGACCGGCGCCGACGCCTGCTCCGCCGTATGGCGCGGCATCGAATGCTCCCCAAACGGCAGGGTAGTGGGCCTCACCCTTCCTTCCCTCAACCTCCGCGGCCCAATAGACTCCCTCTCCACACTAACCTACCTCCGTTTCCTCGACCTCCACGAAAACCGCTTAAACGGCACCGTTTCACCTCTCTTAAACTGCACAAGCCTGGAACTCCTCTACCTCTCCCGCAACGACTTCTCCGGCGAGATTCCGCCGGAGATATCCTCCCTCCGCCTCCTCCTCCGCCTAGACATCTCCGACAACAACATCCGAGGCCCCATCCCCACACAATTTGCGAAACTAACCCACCTCCTCACGCTGAGGTTACAGAACAACGCCCTCTCCGGCCACGTCCCCGACCTTTCCGCTTCCCTCCAAAACCTCACCGAACTCAACGTCACCAATAACGAACTCCGCGGCCACGTCTCCGATTCCATGCTCACCAAATTCGGCAATGCGAGCTTCTCCGGAAACCACGCCCTCTGCGGGTCCACCCCGCTACCTAAATGCTCCGAAACAGAGCCAGGCACAGAGACTACAATAACCGTCCCTGCAAAACCGAGCTCGTTCCCGCAAACAAGTAGTGTAACCGTTCCCGACACTCCGAGAAAGAAAGGATTGAGCGCCGGTGTAATTGTGGCGATCGTGGTGGCGGTTTGCGTGGCGGTGCTGGTGGCGACGTCGTTCGTGGTGGCGCATTGTTGCGCCAGAGGTTCCACCTCTGGCTCGGTGGTGGGGAGCGAGAGTGCCAAGAGGAAGAGTGGGAGTAGCAGTGGGAGCGAGAAGAAGGTGTATGGGAACGGTGAAAACTTGGATAGAGACAGCGATGGGACCAATACTGAGACGGAAAGAAGCAAGCTTGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTCGAGCTTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACTGTTTACAGAGCGGTGCTCGATGACGGCTGCACCGTGGCTGTGAAGAGACTCAAAGACGCTAACCCCTGCGAGAGAAATGAGTTTGAACAGTACATGGATGTTGTAGGGAAGCTCAAGCACCCCAACATTGTTAGACTCAGAGCTTATTATTACGCTAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGGGGACCAGGAAGGATTCCGTTAGATTGGACCACAAGAATAAGTTTGGTGTTAGGTGCGGCTAGAGGGTTGGCACGGATTCACGCATCAAAAATACCTCACGGGAACGTGAAATCTTCCAACGTGCTTCTCGATAAGAACAGCGTCGCTTTAATCTCTGACTTTGGGTTATCATTGATGTTAAACCCCGTTCATGCGATTGCGAGGATGGGAGGGTACAGGACGCCGGAGCAAGTTGAAGTGAAGAGGCTGTCTCAAGAAGCCGACGTGTACGGTTTCGGGGTGCTGCTGTTGGAGGTTCTGACGGGGAGGGCTCCGTCGACGCAGTACCCATCTCCGGCGCGGCCGCGTGTGGAGGAGCTGGCTGAGGTGGATCTTCCGAAGTGGGTGAAGTCGGTGGTGAAAGAAGAGTGGACTTCGGAGGTGTTTGACCAGGAGTTGCTGAGGTACAAGAACATTGAGGATGAGTTGGTGGCGATGCTGCACGTGGGGATGGCGTGCGTGGCGGCGCAGCCGGAGAAGAGGCCGTGTATGTTGGAGGTTGTGAAAATGATTGAGGAGATAAGGGTGGTGGAACAGTCGCCGCTCGGAGATGATTATGATGAGGCTCGCTCGCGCACTTCGTTTTCTCCTTCACTTGCTACCACCCAAGACATCCAATGA 2172 0.5373 MTYNNNSFNTFPQSHTLSNHILIAFANPKSEISFKLKTPPSFPPFPHHNMKQVCLCLIILTLALCLCILCVSAEAAGQNDTLALTEFRLQTDTHGNLLTNWTGADACSAVWRGIECSPNGRVVGLTLPSLNLRGPIDSLSTLTYLRFLDLHENRLNGTVSPLLNCTSLELLYLSRNDFSGEIPPEISSLRLLLRLDISDNNIRGPIPTQFAKLTHLLTLRLQNNALSGHVPDLSASLQNLTELNVTNNELRGHVSDSMLTKFGNASFSGNHALCGSTPLPKCSETEPGTETTITVPAKPSSFPQTSSVTVPDTPRKKGLSAGVIVAIVVAVCVAVLVATSFVVAHCCARGSTSGSVVGSESAKRKSGSSSGSEKKVYGNGENLDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHASKIPHGNVKSSNVLLDKNSVALISDFGLSLMLNPVHAIARMGGYRTPEQVEVKRLSQEADVYGFGVLLLEVLTGRAPSTQYPSPARPRVEELAEVDLPKWVKSVVKEEWTSEVFDQELLRYKNIEDELVAMLHVGMACVAAQPEKRPCMLEVVKMIEEIRVVEQSPLGDDYDEARSRTSFSPSLATTQDIQ* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1576 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 50 714 - -
Gso19g1576 723 MobiDBLite consensus disorder prediction 701 723 - -
Gso19g1576 723 Gene3D Transferase(Phosphotransferase) domain 1 491 709 - -
Gso19g1576 723 Gene3D Ribonuclease Inhibitor 141 289 IPR032675 -
Gso19g1576 723 Gene3D Ribonuclease Inhibitor 73 140 IPR032675 -
Gso19g1576 723 MobiDBLite consensus disorder prediction 378 392 - -
Gso19g1576 723 PANTHER LRR RECEPTOR-LIKE KINASE 50 714 - -
Gso19g1576 723 MobiDBLite consensus disorder prediction 352 376 - -
Gso19g1576 723 Pfam Leucine rich repeat N-terminal domain 79 117 IPR013210 -
Gso19g1576 723 Pfam Protein kinase domain 419 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1576 723 MobiDBLite consensus disorder prediction 351 392 - -
Gso19g1576 723 Gene3D Phosphorylase Kinase; domain 1 384 490 - -
Gso19g1576 723 MobiDBLite consensus disorder prediction 709 723 - -
Gso19g1576 723 SUPERFAMILY L domain-like 79 258 - -
Gso19g1576 723 MobiDBLite consensus disorder prediction 283 314 - -
Gso19g1576 723 SUPERFAMILY Protein kinase-like (PK-like) 419 689 IPR011009 -
Gso19g1576 723 ProSiteProfiles Protein kinase domain profile. 415 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1576 723 MobiDBLite consensus disorder prediction 283 313 - -
Gso19g1576 723 Pfam Leucine rich repeat 192 250 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1576 Gso-Chr19 44686648 44689397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1576 78 719 Receptor kinase-like Gene Family AT2G36570 65.455 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso19g1576 Pkinase 3.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1576 - - gmx:100781702 1351.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1576 19 44686648 44689397 Gso3g1595 3 41872165 41874666 GST
Gso19g1576 19 44686648 44689397 Gso10g0564 10 6360361 6363869 PCT
Gso10g0564 10 6360361 6363869 Gso19g1576 19 44686648 44689397 PCT