Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1539 ATGGTGGTGGCAGAGTTCACTAGTGGTGGCTTGAGGGGAATGAAGGCCTTCAGCTACCATGTTCTCACGGGGCGTTGGTTCATGCTATTTGCATCTTTACTCATCATGTCCGTTGCAGGGGCAACCTACATGTTTGGAATATACTCTAACGAGGTCAAAACCTCATTAGGGTACGACCAATCCACTCTCAACTTGCTAAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCCGGGTTGGTCAACGAGGTAACACCACCCTTTGTGGTACTCTCAATTGGGGTCATCATGAACTTCTTCGGCTACTTCATGATATTTCTTGCTGTCTCTGGGCGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACTTTTGCCAACACTGGTGCTTTGGTCACGTGTGTCAAAAACTTCCCTGGAAGCCGTGGCAGTATCTTAGGCCTACTCAAAGGCTACGTTGGTCTAAGTGGTGCCATCATCACACAGCTTTACCATGCTTTCTATGGTAATCATAACTCTCAAGCTCTTATCTTACTCATTGCTTGGCTCCCTGCTGCTGTTTCCTCCCTTTTTCTTCCAACAATTCGGATAATGAACACAGTACTGCACCAACCCAAGGAGGGCAACAGAGTTTTCTACCACCTTCTATATATTTCACTTGGCCTTGCTGCTTTTCTCATGGTTCTGATCCTTGTACAAAACAAGCTTAGTTTTTCAAGGATTGAATACATAGTAGATGGCCTTGTGGTTTTCTTCTTTCTTCTTCTCCCACTTGTTGTGGTGTTTAGAGAGGAGATAAACCAATTGAAAGCAAATACTCAATGTTTGACCGATTCACCACCCCAGTTGAAAGTAGTCACTGAAGCTATTCCACCACCAAACGTGGAGCAAGAAGAAGTACCACCAACTACCACAAGTTCCCACGAGAAAAGTTCTTGTTTAAGGAACATATTCAACCCTCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCACTTTTCAGTATTGACATGCTGATTTTGTTCATTGCAACAACGTTTGGTGCTGGAGGAACATTAACAGCCATAGACAACCTGGGACAGATTGGACACTCATTAGGATACCCGAACAAAAGCACAACAACCTTTGTGTCCTTAGTGAGCATATGGAACTACTTGGGAAGAGTAGCTTCAGGTTATGCCTCTGAGATCTTCTTGACCAAATACAAAATCCCTCGTCCCTACATGCTCACTCTAGTTTTGCTTGTCTCTTGTGTTGGCCATGTTCTGATAGCCCTCGGTGTCCCAAACTCCCTCTACTTCGCTTCGGTGATTATAGGGTTTTGTTTTGGAGCTCAATGGCCACTAATGTTTGCAATCATATCAGAAGTTTTTGGCCTCAAATACTACTCCACGTTGTACAACTTTGGAGCCGCGGCAAGCCCTCTTGGGTCTTACATTCTGAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCGAAAGGACTCACTAGAGAAGAAGGGAAGGACCTAACTTGCGTGGGAGTGCAATGCTATAAAATGGCTTTTATCATAATCACGGCTTCAACGTTGGTTGGTTGTTTAGCTTCGGTCATTTTGGCGCTGAGGACTAGAAAGTTTTACAAAGGGGATATCTATAGAAAATTTAGAATGGAACATGAAGCAATGGAGATTACCAAGACTGCTAATTAA 1746 0.4393 MVVAEFTSGGLRGMKAFSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLVNEVTPPFVVLSIGVIMNFFGYFMIFLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIITQLYHAFYGNHNSQALILLIAWLPAAVSSLFLPTIRIMNTVLHQPKEGNRVFYHLLYISLGLAAFLMVLILVQNKLSFSRIEYIVDGLVVFFFLLLPLVVVFREEINQLKANTQCLTDSPPQLKVVTEAIPPPNVEQEEVPPTTTSSHEKSSCLRNIFNPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYASEIFLTKYKIPRPYMLTLVLLVSCVGHVLIALGVPNSLYFASVIIGFCFGAQWPLMFAIISEVFGLKYYSTLYNFGAAASPLGSYILNVKVAGVLYDKEALKQLKAKGLTREEGKDLTCVGVQCYKMAFIIITASTLVGCLASVILALRTRKFYKGDIYRKFRMEHEAMEITKTAN* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1539 581 Gene3D MFS general substrate transporter like domains 324 558 IPR036259 -
Gso19g1539 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 578 - -
Gso19g1539 581 Pfam Nodulin-like 25 273 IPR010658 -
Gso19g1539 581 PANTHER MFS TRANSPORTER 9 578 - -
Gso19g1539 581 SUPERFAMILY MFS general substrate transporter 25 560 IPR036259 -
Gso19g1539 581 CDD MFS_Mch1p_like 24 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1539 Gso-Chr19 44319871 44321977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1539 14 568 Nodulin-like Gene Family AT2G39210 65.897 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1539 - - gmx:100818752 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1539 19 44319871 44321977 Gso3g1559 3 41529709 41531959 GST
Gso19g1539 19 44319871 44321977 Gso13g1124 13 25854609 25856935 PCT
Gso13g1124 13 25854609 25856935 Gso19g1539 19 44319871 44321977 PCT