Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1538 ATGAAGACTTTGATCTACCATGTTCTCACGGGGCGTTGGTTCATGCTCTTTGCATCTTTACTCATCATGGCCGCAGCAGGAGCAGCCTACATGTTCGGCATGTACTCTAACGAGGTCAAAACCTCTTTAGGGTACGACCAAACCACTCTTAACTTGTTCAGCTTCTTCAAAGACGTTGGTGCCACCGTTGGAATCATATCAGGGTTAGTCAACGAGATAACTCCACCTTGGGTAGTTCTGTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATTTCTTGCTGTCACTGGCCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGCTCAAATTCTCAAACTTTTGCTAACACAGGTGGTACTGTCACGTGTGTGAAAAACTTCCCTGGAAGCCGTGGCAATGTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATTGCACAGCTCTACCATGCCTTCTACGGTGATCATAACCCTCAGGCTCTTATTTTACTCATTGCGTGGCTTCCTGCTGCTGTTTCCTTTCTTTTCCTTCCAACAATTCGGATATTCAACACAGTTCACCACCCAAATGAGAACAAAGTTTTCTACCACCTTCTATATATATCACTAGTCCTTGCCGGGTTTCTCATGGTTCTTATCATCATGCAAAACAAGCTCAGGTTTACAAGGCCTGAATACATAGCCGATGGGGTTGTGGTTTTCTTCTTTCTCCTTCTCCCACTTGTTGTGGTGTTTAGAGAAGAAATAAACCAATTGAAAGCCAAAACGCAAGGTTTGACCGATTCAGTAAAAGTAGTCACTGAAGTTATTCCACCTCCAAATGTGGTGGAGCAAGAAGTCCCATCAACTACCACAAGCTCCCACGAGAAAAGTTCTTGTTTTGGGAATATACTCAAACCCCCAAAAAGAGGAGAAGACTACACCATCTTGCAAGCACTTTTCAGCATTGACATGCTGATTCTGTTCATAGCAACAACATTTGGTGCTGGCGGAGCATTAACAGCCATAGACAATTTAGGACAGATTGGACGCTCATTAGGGTACCCAAGAAAAAGCATTACAACATGCGTGTCCTTATTGAGCATATGGAACTACTTGGGAAGAGTAGTTGCAGGTTACGCCTCTGAAATATTCTTAACCAAATACAAACTCCCTCGTCCCTACATGCTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGCCACATTCTGATAGCCATTGGTGCCCCAAACTCTCTCTACTTGGCTTCAGTGATTATAGGGTTCTGTTTGGGAGCTCAGTGGCCACTAATGTTTGCAATCATATCAGAAATATTTGGCCTCAAATACTACTCCACGTTGTTCAACTTTGGAGCCGTAGCAAGCCCTGTTGGGTCTTACATTCTGAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCACGAGAGAAGAAGGGAAGGACCTAACTTGCGTGGGAGTGCAATGCTATAAAATGGCTTTTATCATAATCACGGCTTCAACGCTGTTTGCATGCATTGTTTCGTTTGTTTTGGTGGTGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTCAGAGTGGAACATGAAACAGGAGAGAATGAAATGGGGATCACTAAAACTCGTAATAGTCCTTCTGGTTGA 1716 0.4341 MKTLIYHVLTGRWFMLFASLLIMAAAGAAYMFGMYSNEVKTSLGYDQTTLNLFSFFKDVGATVGIISGLVNEITPPWVVLSIGVIMNFFGYFMIFLAVTGRIAKPQVWQMCLYICIGSNSQTFANTGGTVTCVKNFPGSRGNVLGLLKGYVGLSGAIIAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHHPNENKVFYHLLYISLVLAGFLMVLIIMQNKLRFTRPEYIADGVVVFFFLLLPLVVVFREEINQLKAKTQGLTDSVKVVTEVIPPPNVVEQEVPSTTTSSHEKSSCFGNILKPPKRGEDYTILQALFSIDMLILFIATTFGAGGALTAIDNLGQIGRSLGYPRKSITTCVSLLSIWNYLGRVVAGYASEIFLTKYKLPRPYMLTLVLLLSCVGHILIAIGAPNSLYLASVIIGFCLGAQWPLMFAIISEIFGLKYYSTLFNFGAVASPVGSYILNVKVAGVLYDKEALKQLKAKGLTREEGKDLTCVGVQCYKMAFIIITASTLFACIVSFVLVVRTRKFYKGDIYRKFRVEHETGENEMGITKTRNSPSG* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1538 571 CDD MFS_Mch1p_like 11 527 - -
Gso19g1538 571 Gene3D MFS general substrate transporter like domains 324 542 IPR036259 -
Gso19g1538 571 Pfam Nodulin-like 12 258 IPR010658 -
Gso19g1538 571 SUPERFAMILY MFS general substrate transporter 13 543 IPR036259 -
Gso19g1538 571 PANTHER MFS TRANSPORTER 1 567 - -
Gso19g1538 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 567 - -
Gso19g1538 571 Pfam Major Facilitator Superfamily 334 538 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1538 Gso-Chr19 44311807 44314470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1538 1 550 Nodulin-like Gene Family AT2G39210 64.401 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1538 - - gmx:100798313 1087.4