Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1526 ATGGGTAAAACATGTAGTAGTAGTTGTTCTTGGGGATTGTGGATCGGAGGGTTTGGAGTAGTGGAGCCTATGATGAGGAAACTACAAAGCACTTTCTCACGTCCAAAAGGGGTGAAGCAGGGCCATTTTTTGGTGATTGCAACACAAGGGTGGAAGCCAGAGAGATTCTCTATTGAGTTGGAGTTTTTGGATCACCCTGACTTTGTGAAGTTGTTAAAGCAAGCTGAAGAAGAGTACGGATTCTCTCAGGTAGGAGCACTTGCAATTCCTTGCGAACCAGATGACTTGAAGAGAATCATTACAAGGAAAAAGAATAGGAACAAGGGTATTGCTATTGCCTGTTGGGTTAAAGGGCTTAGAGTTGCATGA 369 0.4363 MGKTCSSSCSWGLWIGGFGVVEPMMRKLQSTFSRPKGVKQGHFLVIATQGWKPERFSIELEFLDHPDFVKLLKQAEEEYGFSQVGALAIPCEPDDLKRIITRKKNRNKGIAIACWVKGLRVA* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1526 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 114 IPR003676 GO:0009733
Gso19g1526 122 PANTHER SMALL AUXIN-UP RNA-RELATED 13 114 - -
Gso19g1526 122 Pfam Auxin responsive protein 33 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1526 Gso-Chr19 44149444 44149812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1526 16 113 Calmodulin-binding Proteins AT2G24400 33.673 1.43e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1526 - K14488 gmx:100795119 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1526 19 44149444 44149812 Gso3g1544 3 41339335 41339825 GST