Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1525 ATGGAGGTTGGAAAGAAGAAGATGCTCCTCAAGTCTTTGATCACAAAGGTGATAAAGGGTCTTCCATTATTCTTGGCACCAAATGGAGGAGCACGTGGTACGAGAAGGGTTAGTTATTTGAGTGACATTGTTGAAGAGGAGAATGAGAGGACAACAAAGGTGCCAGAAGATGTTAAAGAAGGACACTTTGCGGTTGTAGCAATGCATGGTGAAGAAACCAAAAGGTTCGTTGTTGAGTTGGATTATTTAACTGATCATGCTTTCTTGAAGCTGTTGGAGCAAGCAAGGGAAGAGTATGGCTTTCAACAGAAGGGTGCACTTGCAGTTCCCTGCACTCCTGAAGAACTTCAGAAGATTATAGAGAATCGAAGAGTGGACATGCCACTACTTAATTAA 396 0.4242 MEVGKKKMLLKSLITKVIKGLPLFLAPNGGARGTRRVSYLSDIVEEENERTTKVPEDVKEGHFAVVAMHGEETKRFVVELDYLTDHAFLKLLEQAREEYGFQQKGALAVPCTPEELQKIIENRRVDMPLLN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1525 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 124 IPR003676 GO:0009733
Gso19g1525 131 Pfam Auxin responsive protein 42 120 IPR003676 GO:0009733
Gso19g1525 131 PANTHER F8A24.8 PROTEIN 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1525 Gso-Chr19 44138473 44139240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1525 45 127 Calmodulin-binding Proteins AT5G20810 39.535 5.10e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1525 - K14488 gmx:100794597 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1525 19 44138473 44139240 Gso3g1543 3 41331400 41332135 GST