Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1524 ATGCTTCGGTCTTGTCTCAAGCAGTTGCAAAAGAATCTATCGAGTTTTGTTCACTCCAATGAAGATCAAGTACTGGAAGCAGTAACTTTGGTGCCAGAAGATGTTATGGAGGGTCATTTTGCTGTTCTTGCCATCAAGGGTGAAGATACAAGAAGGTTTATTGTTAAGTTAGACTACTTGACTGATCCTATGTTCATGGAACTACTGAACCAAGCTCGAGAGGAGTATGGTTTCAAACAAAAGGGAGCACTTGCAGTCCCTTGCAGGCCTCAGGAATTACAGAACATTCTAGATGGCCCAAGAGCCAAAGCTGAAAGGTCATTTGTGGATGGGGGCGACATGTTTCACCTTCCAAATGTATTAAGGCCCCTCAGCAGAAGCAAGTTTCTTCATGGCATTGTGAGCTTTATAAACATCAGACTTTATATTAAAAAGATCATATATTTATCGAAAAAACAATAA 462 0.4048 MLRSCLKQLQKNLSSFVHSNEDQVLEAVTLVPEDVMEGHFAVLAIKGEDTRRFIVKLDYLTDPMFMELLNQAREEYGFKQKGALAVPCRPQELQNILDGPRAKAERSFVDGGDMFHLPNVLRPLSRSKFLHGIVSFINIRLYIKKIIYLSKKQ* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1524 153 Pfam Auxin responsive protein 29 97 IPR003676 GO:0009733
Gso19g1524 153 PANTHER F8A24.8 PROTEIN 1 105 - -
Gso19g1524 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1524 Gso-Chr19 44127905 44128845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1524 2 97 Calmodulin-binding Proteins AT4G34750 39.583 3.02e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1524 - K14488 gmx:100794061 277.715