Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1518 ATGAAGGGAAAGTTTCTAAGAGGGTGCCTTAACAAGTGGAAGAAAATGGGAAGTAGAGTGTTCCATTGTGCTGCCTACGGTTACTGCTGTGAATGGGAACTGGGGTCATCCATGCATGAAGATGAAGGAGACTCCATTCCCAACGATGTGCCAAAGGGTCACTTGGTTGTGTACGTGGGAGAGCACCATAAGAGATATGTCATCAAGATTACCTTACTCAATCATCCACTCTTCAAGACTCTGCTGGATCAAGCTAAGGATGAGTATGATTTCATTGCAGATTCAAAGCTCTATATTCCTTGCAGTGAGCATCTTTTCCTCACTGTCCTTCGCCGTGCAAGCACTCCACACAACGAACGAGTGTTTGTGCGTGTCTGA 378 0.4577 MKGKFLRGCLNKWKKMGSRVFHCAAYGYCCEWELGSSMHEDEGDSIPNDVPKGHLVVYVGEHHKRYVIKITLLNHPLFKTLLDQAKDEYDFIADSKLYIPCSEHLFLTVLRRASTPHNERVFVRV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1518 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 121 IPR003676 GO:0009733
Gso19g1518 125 Pfam Auxin responsive protein 37 111 IPR003676 GO:0009733
Gso19g1518 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1518 Gso-Chr19 44059736 44060256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1518 31 110 Calmodulin-binding Proteins AT4G34750 40.000 5.40e-18 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1518 19 44059736 44060256 Gso3g1534 3 41254643 41255263 GST
Gso19g1518 19 44059736 44060256 Gso10g0498 10 5430841 5431309 PCT