Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1515 ATGGAAGCAACTAATGGCCACCAAAATGGTTCGTTTTGCTTGTCCAGTACTAAGGGAAGTGATCCGTTAAACTGGGGAGCGGCGGCGGAGGCGATGAAGGGGAGCCACCTGGACGAGGTGAAGCGCATGGTGTCCGAGTACCGGAAGCCGGTGGTCCGGCTCGGCGGCGAGACGCTCACCATCGCCCAGGTGGCCGCCGTGGCTGGACACGACCACGGCGTGACGGTGGAGCTCTCGGAGTCTGCCCGAGAAGGAGTGAAGGCGAGCAGTGAGTGGGTGATGAACAGCATGAACAACGGAACTGACAGTTACGGCGTCACCACCGGCTTCGGTGCCACGTCACACCGCCGAACCAAACAAGGTGGTGCTCTGCAGAAAGAACTCATCAGGTTTTTAAACGCAGGAATATTTGGAAATGGAACCGAATCAAGCCACACCCTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAAGGGTACTCAGGCATTAGATTTGAAATCCTAGAAGCCATCACCAAGCTCCTCAACAACAATGTTACCCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCAGACCCAACTCCAAAGCTGTTGGACCTAATGGAGAAGTACTTAACGCTAAGGAAGCTTTTGAATTGGCTAGCATCAATTCTGAGTTCTTTGAATTGCAACCCAAGGAAGGCCTTGCCCTTGTTAATGGCACTGCTGTTGGTTCTGGATTAGCTTCTATGGTTCTCTTTGAGGCTAATATACTAGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCGGAAGTGATGCAAGGGAAACCTGAATTTACTGACCATTTGACACACAAGTTAAAGCACCATCCTGGTCAAATTGAGGCTGCTGCAATTATGGAGCATATTTTGGATGGAAGTTCCTACATGAAAGCTGCTAAGAAGTTGCATGAGATTGATCCATTGCAAAAGCCAAAACAAGATCGATATGCCCTTAGAACTTCACCACAATGGCTTGGTCCTCTCATTGAAGTGATTCGTTTCTCGACTAAGTCAATTGAGAGAGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTCTCAAGGAACAAGGCATTACATGGTGGCAATTTCCAAGGAACCCCAATTGGAGTCTCTATGGACAACACGCGTCTGGCTCTTGCATCTATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTCACTGCTAGCAGAAATCCTAGCTTGGACTATGGGTTCAAGGGAGCTGAAATTGCCATGGCTTCTTACTGCTCTGAACTCCAATATCTTGCAAATCCAGTAACTAGCCATGTCCAAAGTGCTGAGCAGCATAACCAGGATGTGAACTCTTTGGGTTTAATTTCATCCAGAAAGACAAATGAAGCTATCGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCGATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAACTCGGTCAAGAACACTGTGAGCCAAGTTTCCAAAAGGATTCTTACCACAGGTGTCAATGGAGAACTCCATCCTTCAAGATTTTGTGAAAAGGATCTGCTAAAAGTGGTTGATAGGGAGTACGTATTTTCCTACATTGATGACCCCTGCAGTGCTACATACCCATTGATGCAAAAACTTAGGCAAGTGCTTGTAGATCATGCCTTGGTAAATGCAGAGAATGAGAAGGATATGAACACATCCATCTTTCAAAAGATAGCAAACTTTGAGGAGGAGTTGAAGAATTTCTTGCCAAAAGAGGTTGAAAGTGCAAGGGTTGCTTATGAGAGTGGCAAAGCTGCAATTCCGAACAAGATCCAAGAATGCAGATCTTACCCACTGTACAAGTTTGTGAGAGAGGAATTAGGGACTGGGTTGCTAACTGGAGAGAAGGTCAGGTCACCAGGTGAAGAGTTTGACAAATTATTCACAGCAATGTGCCAGGGCAAAATTATTGATCCTCTTCTGGAGTGCCTTGGGGAGTGGAATGGAGCTCCTCTTCCAATCTGTTGA 2139 0.4605 MEATNGHQNGSFCLSSTKGSDPLNWGAAAEAMKGSHLDEVKRMVSEYRKPVVRLGGETLTIAQVAAVAGHDHGVTVELSESAREGVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALVNAENEKDMNTSIFQKIANFEEELKNFLPKEVESARVAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLLECLGEWNGAPLPIC* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1515 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Gso19g1515 712 Pfam Aromatic amino acid lyase 59 535 IPR001106 -
Gso19g1515 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
Gso19g1515 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
Gso19g1515 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Gso19g1515 712 CDD PAL-HAL 57 522 IPR001106 -
Gso19g1515 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Gso19g1515 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gso19g1515 712 Gene3D - 13 258 IPR024083 -
Gso19g1515 712 Gene3D - 525 646 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1515 Gso-Chr19 44028964 44032926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1515 21 712 Monolignol Biosynthesis Gene Families AT2G37040 84.682 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1515 K10775 - gmx:100811101 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1515 19 44028964 44032926 Gso3g1529 3 41194629 41197980 GST