Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1499 ATGTTCATGGACAAAGATGCTAATTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAGTGGTATTTCTTTACTCCTAGAGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAAGCTACTGGGACTGACAAACCCATTTTCACTTCCTGTGGGATGAAGAGCATTGCTGTGAAGAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAACCGACTGGATCATGCATGAGTATAGATTGCATGATTCCACGATCTCCAATTCAAAGCAAGGAGGGACCATGAGACTGGATGAGTGGGTGCTGTGCCGGGTTCGACAAAAGACTATCAGCCCAAGAAGCCTTTGGGAAGACTCAAATGAACCCATTTATGAACCAACAAGCTACTTTCAACAAATGAGCGAGAAATCAAATCCTGAACCAGTCAAAAACTCTCTGCATAGTGAATATCCAATGTTGCCTTATATTCTGGCTTCTAAGAGTGCTCTGCCTAATTCTATTGACATGGCCTCAAGCTCGAGCTTTGGCTGTAATGATGATGTGAAAGCATATGCTTCATTGCATGATGGCAACTTAAATAATATAATAATAGGAGCACAGTTCATAGCACCTGTAGCTGAGGACTTGTTTAATCCTCTGAAGAGAAGAAACATTGAAGAGAACGAGTTGGACTTGTATGCTCCCCTCAATAAAAAACTAAACGAAGAAGTTGATGTTGGGAAGCAAATACTTGAGAAAGATGTCAACAAAGGCTACAATTTCAATAACTTTGACCAGTGGACTTCCATCATACAACCCCAAGAGTTTAATAGCTTGGCCTTTACGAAATATGCATGA 1014 0.4201 MFMDKDANSEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKSIAVKKALVFYKGRPPKGSKTDWIMHEYRLHDSTISNSKQGGTMRLDEWVLCRVRQKTISPRSLWEDSNEPIYEPTSYFQQMSEKSNPEPVKNSLHSEYPMLPYILASKSALPNSIDMASSSSFGCNDDVKAYASLHDGNLNNIIIGAQFIAPVAEDLFNPLKRRNIEENELDLYAPLNKKLNEEVDVGKQILEKDVNKGYNFNNFDQWTSIIQPQEFNSLAFTKYA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1499 337 Gene3D NAC domain 22 170 IPR036093 GO:0003677|GO:0006355
Gso19g1499 337 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Gso19g1499 337 ProSiteProfiles NAC domain profile. 13 167 IPR003441 GO:0003677|GO:0006355
Gso19g1499 337 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 299 - -
Gso19g1499 337 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Gso19g1499 337 PANTHER NAC TRANSCRIPTION FACTOR 56 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1499 Gso-Chr19 43815908 43817847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1499 6 167 NAC Transcription Factor Family AT1G69490 69.136 4.47e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso19g1499 NAM 4.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1499 - - gmx:100788799 699.508