Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1498 ATGAGTGTCATCGACATTCTCACCAGAGTTGATTCCATTTGCAAAAAGTACGACAAATACGACGTCGAAAAGCAAAGGGACTCCAATCTCTCCGCCGACGATGCATTCGCCAAACTCTACGCCTCCGTCGACGCCGACATCGAGGCCTTACTTCAGAAAGCAGAAACCGCTGACAAGGAGAAAAGTAAGGCATCCACTGTAGCGATCAATGCCGAGATTCGTCGAACCAAGGCTAGATTGTTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGAAATGATTTGGCTCTTGCATTGCCGGATAGGATTCAAGCTATCCCAGATGGGGCCCCTGCAGCACCCAAACAAACTGGAAGTTGGGCAGCTTCAGCTTCACGTCCTGGAATTAAATTTGATTCAGATGGGAAATTTGATGATGAATACTTCCAACAAACTGAAGAATCAAGTCGATTCAGGCAAGAGTACGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATATGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATCGATACTAAGGTGGACAGGGCATCTTCTGACCTTAAAAATACCAATGTTAGACTTAGAGACACAGTGAACCAGCTTCGATCCAGTCGGAACTTTTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCTTATTTGTACAATGTGCTAAAGAAATGA 798 0.4323 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1498 265 PANTHER SYNTAXIN-73 1 261 - -
Gso19g1498 265 MobiDBLite consensus disorder prediction 124 150 - -
Gso19g1498 265 CDD SNARE_Qc 175 230 - -
Gso19g1498 265 Gene3D - 170 231 - -
Gso19g1498 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Gso19g1498 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Gso19g1498 265 SMART tSNARE_6 165 232 IPR000727 -
Gso19g1498 265 Pfam SNARE domain 207 256 IPR000727 -
Gso19g1498 265 Coils Coil 40 60 - -
Gso19g1498 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gso19g1498 265 PANTHER SYNTAXIN 1 261 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1498 Gso-Chr19 43808607 43812948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1498 1 264 SNARE and Associated Proteins AT3G09740 76.692 3.16e-154 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1498 K08506 - gmx:100804155 498.434