Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1494 ATGGCCGATGACTTCGACTTCGCAGATAAAGTTCCTCCTTCGTTCGATCGCGTGGGAAATGTGATCAAGGATTCTGGATCCAAAGCGTTCAATCCGGGTTTAATTGTCCTCCTGGTTGTTGGTGGGTTGCTTTTGACATTCCTCATTGGAAATTATGTGCTCTACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCCGTTTCAAAGAAGAAGATGAAAAAGGAGAGACTAAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 270 0.4556 MADDFDFADKVPPSFDRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1494 89 MobiDBLite consensus disorder prediction 65 89 - -
Gso19g1494 89 Pfam DNA binding protein S1FA 26 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso19g1494 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso19g1494 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
Gso19g1494 89 MobiDBLite consensus disorder prediction 65 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1494 Gso-Chr19 43771351 43773020 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gso19g1494 S1FA 3.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1494 - - gmx:100305877 161.384