Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1482 ATGGAGAGTATCTTCCTCTCCTCCTTCAAGTTTGCACTCTCCCTCTCACTCCTACTCCACTCACCTTCTTTTTCCTCTGCTCAGATCATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTACAGAAAAATTTACTGATGAACTTGGTCTTCATTGGACTCCTGATGATAAGCTTACGTATGGACAAATAAGCACTATATCAGTTGCAAACGAGACACGGAAGCAATACACAACACTTCGACACTTTCCCGCTGATTCCAGGAAATACTGCTACACTCTTGAAGTTGTTAGCAGGACGAGATACCTATTGAGGGCAAGCTTCTTATACGGGAACTTTGACAATAACAATGTTTATCCGAAATTTGACATTTCTGTTGGGGCTACGCATTGGTCTACTATCGTTATATCTGATGCTAATAGCATAGAAATGCGAGAGCTTATATTTTTGGCTTCGAGTCCTACAGTAAGTGTATGCTTATCGAATGCAACAACAGGACAACCATTTATATCTACACTAGAACTTCGGCAGTTCAACGGTTCGGTTTACTATACACAATTTGAGCAACACTTCTACCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGATTCTGTGAAGAAAGCTAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACAACAGTACCAATTGATGTCAACAGAGATGAAATGCCTCCAGTGAAAGTGATGCAAACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCGGGTACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGGATCCCGATGAGTCTAGAAAATTCAGGCTAGTACTTCCGGGTCAGCCAGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGCCTCTATGAACCAGGATTTACCAATATATCTTTACCCTTTGTGCTCTCTTTTAGATTTGGCAAGACATATGATTCTTCTAGGGGACCTCTCCTAAATGCCATGGAGATAAATATGTATTTGGAGAAAAATGATGGCTCTCTAGATGGAGCAACAATTTCCAATATACTTTCACACTACTCTGCAGCAGACTGGCTCCAAGAAGGTGGTGATCCATGTCTGCCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAGCCAAGAATAGTTTCAATCTTGTTATCCAATAAAAACTTAACTGGAAATATTCCTTTGGATATCACCAAATTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGTCCATTTCCAGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAATCAATTGACAGGTGTGCTCCCAACCTCTTTGACAAACCTTCCTAGCTTGAGGGAACTGTATGTGCAAAATAATATGTTATCTGGAACAATACCATCAGAACTTCTAAGCAAAGATTTGGTTTTGAACTACTCTGGAAATATAAATCTTCACAGAGAAAGTAGAATAAAGGGACACATGTATGTTATCATTGGTTCATCAGTTGGAGCTTCTGTTCTACTTTTGGCTACTATTATATCTTGCTTATATATGCATAAAGGGAAGAGAAGATATCATGAGCAAGGCTGCATTGATTCTCTCCCTACACAAAGGCTGGCTTCTTGGAAGAGCGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTATTCTGAAATTGAAAATGCTACAAATAACTTTGAGAAAAAAATTGGTTCTGGTGGTTTTGGAGTTGTATACTATGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCAAACGAGGTTACTCTTCTTTCAAGAATACACCACAGAAATTTGGTGCAGCTGCTTGGTTATTGTCGAGATGAAGAGAATAGTATGCTTGTTTATGAGTTCATGCATAATGGCACTCTAAAGGAACATCTTTATGGCCCATTAGTGCATGGACGGAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATGCTGCCAAAGGGATTGAATATCTTCACACGGGTTGTGTTCCTGTCGTTATCCACAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAGAGCCAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGTTTCCCATGTTTCAAGTATAGTTCGAGGAACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACCGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGCTTCGGTGTAAATTGCCGAAACATAGTTCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATCGATCCCTTGTTGCGGAATGACTATGACCTTCAATCGATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCCCACGGACATATGCGACCATCAATTTCAGAAGCTCTAAAGGAGATCCAAGATGCAATATCTATTGAGAGACAGGCAGAAGCATTAAGAGAAGGCAACTCAGATGATATGTCAAAAAATTCTTTTCATTCTTCCATGAACATGGGGTCAATGGATCTAGGTGGAGCTGAGAGTTACCTGTCAATTGATGAATCAATTGCACAGCCTACAGCAAGATAG 2796 0.3988 MESIFLSSFKFALSLSLLLHSPSFSSAQIMQGFVSLDCGGTEKFTDELGLHWTPDDKLTYGQISTISVANETRKQYTTLRHFPADSRKYCYTLEVVSRTRYLLRASFLYGNFDNNNVYPKFDISVGATHWSTIVISDANSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEQHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTTVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLDPDESRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISNILSHYSAADWLQEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNKNLTGNIPLDITKLVGLVELWLDGNMLTGPFPDFTGCMDLKIIHLENNQLTGVLPTSLTNLPSLRELYVQNNMLSGTIPSELLSKDLVLNYSGNINLHRESRIKGHMYVIIGSSVGASVLLLATIISCLYMHKGKRRYHEQGCIDSLPTQRLASWKSDDPAEAAHCFSYSEIENATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLVHGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPSISEALKEIQDAISIERQAEALREGNSDDMSKNSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1482 931 SUPERFAMILY Protein kinase-like (PK-like) 588 873 IPR011009 -
Gso19g1482 931 Gene3D Transferase(Phosphotransferase) domain 1 679 901 - -
Gso19g1482 931 Pfam Leucine rich repeat 460 500 IPR001611 GO:0005515
Gso19g1482 931 ProSiteProfiles Protein kinase domain profile. 603 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1482 931 Gene3D Phosphorylase Kinase; domain 1 579 678 - -
Gso19g1482 931 Gene3D Ribonuclease Inhibitor 379 530 IPR032675 -
Gso19g1482 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Gso19g1482 931 Pfam Malectin-like domain 36 365 IPR024788 -
Gso19g1482 931 PANTHER TYROSINE KINASE DOMAIN PROTEIN 20 931 - -
Gso19g1482 931 SUPERFAMILY L domain-like 404 518 - -
Gso19g1482 931 CDD STKc_IRAK 609 876 - -
Gso19g1482 931 Pfam Protein tyrosine and serine/threonine kinase 605 805 IPR001245 GO:0004672|GO:0006468
Gso19g1482 931 SMART serkin_6 603 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1482 931 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Gso19g1482 931 PANTHER OS07G0107800 PROTEIN-RELATED 20 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1482 Gso-Chr19 43673786 43681151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1482 25 713 Receptor kinase-like Gene Family AT2G37050 69.971 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso19g1482 Malectin_like 5.5e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1482 - - gmx:100784017 1845.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1482 19 43673786 43681151 Gso3g1497 3 40883037 40890265 GST
Gso19g1482 19 43673786 43681151 Gso10g0426 10 4537098 4544282 PCT
Gso10g0426 10 4537098 4544282 Gso19g1482 19 43673786 43681151 PCT