Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1463 ATGTCTCGTCTAACACCATCACCAACCAACCCTGTCCACGAAGACAGGCTTCCTTTCTTCAACCAATCCATGGAACTAGTCCAACCCCCAACCCGAACCAGATCCAGAACCCTCGGCGACCTCCTTAAACGCGTCGAGGATGCTCAAAACGACACTCCTCTTGCACCACCCCACCATGTTCTCGATCTCTCCTCTTCCTCCGCCACCCACCCCTTTGTCCTCTCCTTCACCAACTTAACCTACAACGTCAACCTCCGCCGCAAGTTCACTTTTTTTCCCGCCACCACCGCTTCCGCGCCCGACCACGAAACCAAACCCAACGGCACCAAGACTCTCCTCAACGACATCTCCGGCGAGGCCAGGGACGGCGAGATCATGGCCGTTCTCGGCGCCAGCGGCTCCGGAAAGTCCACCTTAATCGACGCCCTCGCCGATAGAATCTCAAAAGAAAGCCTCAGAGGCACGGTGAAATTAAACGGCGACGTTCTGGAATCGAGTCTTTTGAAGGTTATATCCGCTTACGTCATGCAAGACGACCTCCTCTTTCCCATGCTCACCGTCGAAGAAACCCTAATGTTCGCCGCGGAGTTCAGACTCCCTCGCTCTTTCTCAAAGTCCAAGAAAAAGGCTCGTGTACAAGCCCTCATCGACCAGCTCGGCCTCCGCTCCGCCGCCTCCACCGTCATCGGCGACGAGGGCCACCGCGGAGTCTCCGGCGGCGAACGCCGCCGAGTCTCCATCGGCACCGACATCATCCACGACCCCATCGTGCTCTTCCTCGACGAACCAACCTCCGGCCTCGACTCCACCAGCGCCTTCATGGTCGTCAAAGTCTTACAGCGAATCGCTCAGAGCGGAAGCATCGTCATCATGTCCATTCACCAACCTAGCTACAGAATCTTGAGCCTCTTAGACCACTTGATCTTCCTCTCCCACGGAAACACCGTCTTCAGCGGCTCTCCGGCGAACCTTCCCGCCTTCTTCTCCGAGTTCGGCCACCCCATCCCGGAGAACGAAAACCGAACCGAATTCGCACTCGACCTAATCCGCGAACTCGAACAAGAAGCTACTGGTACCAAGAGTTTAGTAGACTTCAACAAATCCTGGCAGCTGAAAAACAAAAACCAGGCCCAGGCCCAGAACGAGTATGATTCCAAACTATCTCTCAAGGACGCTATCAGCGCTAGCATTTCTAGAGGCAAACTCGTGTCCGGCACTAACGGTAACGGCAGGAACAACTCAACGGCACTGGTTTCAGTTCCCGCCTTCGCGAATTCGTTTTGGATGGAGATGTTGGTGATAGGAAAACGGTCGCTAACTAACTCAAGGAGGATGCCGGAGTTATTCGGGATTCGTTTGGGTGCAGTTCTGGTCACGGGGGCAATCTTGGCAACAATCTTTTGGCACCTGGACGATTCCCCGAAAGGAGTCCAAGAGCGCGTGGGGTTCTTCGCGTTCGCCATGTCCACCACGTTCTACACGTGCGCCGAAGCCATGCCGGTGTTCCTCCAAGAGCGCTACATCTTCATGAGAGAAACCGCACACAACGCGTACCGTCGCTCGTCCTACGTGCTCGCGCACGCAATCATTTCCCTCCCTTCCTTGCTTTTTCTCTCCCTCGCATTTGCGGCCACAACGTTTTGGGCCGTGGGCATGACCGGCGGCACTTCGGGCTTCCTCTTTTATTTTATCACAATTTTGGCCTCGTTTTGGGCCGGGAACTCGTTCGTGACGTTCCTCTCCGGCGTGGTGTCGCACGTGATGATAGGGTTCACCGTGGTGGTTGCAATTCTGGCTTACTTCCTCCTCTTCAGCGGGTTCTTCATCAGCAGGGACAGGATCCCTCCGTACTGGATATGGTTCCACTACCTTTCGCTGGTGAAGTACCCGTACGAGGGAGTGCTGCAGAATGAGTTCGATGTGAGGTCTCCGAGGTGTTTTGTGAGAGGGATTCAGATGTTCGAGAACACGCCGCTGGGGATGGTGCCGGAAGCCCTGAAGGTGGAGCTGCTCAAGAGCATGAGCCAGACTCTAGGAATGAACATCACGAGGTCCACCTGCGTGGTCACCGGAGAGGATGTGCTGAAGCAGCAGGGGATCACGCAGCTGACCAAGTGGAACTGCTTGTGGATCACGCTGGCTTGGGGGTTCTTCTTTCGCTTCCTCTTTTATTTGGCGCTGCTCTTTGGGAGCAGGAACAAGAGGAGGTAG 2211 0.555 MSRLTPSPTNPVHEDRLPFFNQSMELVQPPTRTRSRTLGDLLKRVEDAQNDTPLAPPHHVLDLSSSSATHPFVLSFTNLTYNVNLRRKFTFFPATTASAPDHETKPNGTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLRGTVKLNGDVLESSLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSFSKSKKKARVQALIDQLGLRSAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILSLLDHLIFLSHGNTVFSGSPANLPAFFSEFGHPIPENENRTEFALDLIRELEQEATGTKSLVDFNKSWQLKNKNQAQAQNEYDSKLSLKDAISASISRGKLVSGTNGNGRNNSTALVSVPAFANSFWMEMLVIGKRSLTNSRRMPELFGIRLGAVLVTGAILATIFWHLDDSPKGVQERVGFFAFAMSTTFYTCAEAMPVFLQERYIFMRETAHNAYRRSSYVLAHAIISLPSLLFLSLAFAATTFWAVGMTGGTSGFLFYFITILASFWAGNSFVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFDVRSPRCFVRGIQMFENTPLGMVPEALKVELLKSMSQTLGMNITRSTCVVTGEDVLKQQGITQLTKWNCLWITLAWGFFFRFLFYLALLFGSRNKRR* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1463 736 Pfam ABC transporter 113 265 IPR003439 GO:0005524
Gso19g1463 736 Pfam ABC-2 type transporter 294 383 IPR043926 GO:0140359
Gso19g1463 736 ProSitePatterns ABC transporters family signature. 237 251 IPR017871 GO:0005524
Gso19g1463 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 337 IPR003439 GO:0005524
Gso19g1463 736 Gene3D - 102 328 IPR027417 -
Gso19g1463 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 34 729 - -
Gso19g1463 736 SMART AAA_5 122 337 IPR003593 -
Gso19g1463 736 Pfam ABC-2 type transporter 432 639 IPR013525 GO:0016020|GO:0140359
Gso19g1463 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 729 - -
Gso19g1463 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1463 Gso-Chr19 43507887 43510515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1463 112 297 Calmodulin-binding Proteins AT2G36910 30.159 4.67e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1463 K05681 - gmx:100781319 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1463 19 43507887 43510515 Gso3g1477 3 40735740 40738374 GST